WormBase Tree Display for Gene: WBGene00015196

WBGene00015196 SMap: S_parent: Sequence: B0454
  Identity: Version: 1
    Name: Sequence_name: B0454.5
      Molecular_name: B0454.5
        B0454.5.1
        CE37697
      Other_name: CELE_B0454.5 Accession_evidence: NDB BX284602
      Public_name: B0454.5
    DB_info: Database: AceView gene 2D329
        WormQTL gene WBGene00015196
        WormFlux gene WBGene00015196
        NDB locus_tag CELE_B0454.5
        Panther gene CAEEL|WormBase=WBGene00015196|UniProtKB=O17168
          family PTHR33444
        NCBI gene 181992
        RefSeq protein NM_062028.7
        TREEFAM TREEFAM_ID TF343774
        TrEMBL UniProtAcc O17168
        UniProt_GCRP UniProtAcc O17168
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499702
      WBVar01436777
      WBVar00547653
      WBVar01436778
      WBVar00547656
      WBVar01436779
      WBVar01436780
      WBVar01436781
      WBVar01436782
      WBVar01404529
      WBVar01500106
      WBVar01765274
      WBVar01765275
      WBVar01765276
      WBVar01765277
      WBVar01413028
      WBVar00168402
      WBVar00168403
      WBVar00168404
      WBVar00168405
      WBVar00319708
      WBVar01499591
      WBVar00716284
      WBVar00716285
      WBVar00716286
      WBVar00716287
      WBVar00716288
      WBVar00716289
      WBVar00716290
      WBVar00716291
      WBVar00716292
      WBVar00716293
      WBVar00716294
      WBVar00716295
      WBVar00716296
      WBVar00716297
      WBVar00275657
      WBVar01234865
      WBVar01234866
      WBVar01498329
      WBVar01916051
      WBVar02078917
      WBVar01655260
      WBVar00317840
      WBVar01959625
      WBVar00220382
      WBVar00360729
      WBVar00360730
      WBVar00360731
      WBVar00360732
      WBVar00360733
      WBVar00360734
      WBVar00360735
      WBVar00360736
      WBVar00321539
      WBVar01500234
      WBVar02045535
      WBVar01500235
    RNASeq_FPKM (74)
    GO_annotation: 00029391
    Ortholog: WBGene00093223 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00038809 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00054575 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147221 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00207421 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00231145 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g11016 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15980 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22959 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g1906 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g28371 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13601 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-B0454.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9202 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00183.g6499 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17209 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006760 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrII_pilon.g3843 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00249161 Onchocerca volvulus From_analysis: WormBase-Compara
    Paralog: WBGene00018274 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in ventral cord blast cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0454.5
    Corresponding_CDS_history: B0454.5:wp134
    Corresponding_transcript: B0454.5.1
    Other_sequence: CJC07835_1
    Associated_feature: WBsf987133
      WBsf987134
      WBsf987135
      WBsf1011819
      WBsf1011820
      WBsf1011821
      WBsf220978
  Experimental_info: RNAi_result: WBRNAi00009784 Inferred_automatically: RNAi_primary
      WBRNAi00039071 Inferred_automatically: RNAi_primary
      WBRNAi00028151 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12389
      Expr1023410
      Expr1143233
      Expr2000192
      Expr2018412
    Drives_construct: WBCnstr00020811
      WBCnstr00029013
    Construct_product: WBCnstr00029013
    Microarray_results (16)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00032425:down_in_alg-1
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00035269:cde-1_regulated
      WBPaper00037950:A-class-motor-neurons_embryo_enriched
      WBPaper00037950:A-class-motor-neurons_embryo_SelectivelyEnriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:hypodermis_larva_SelectivelyEnriched
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_embryo_SelectivelyEnriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038061:aldicarb_upregulated
      WBPaper00038237:age-1_upregulated_intestine_rescue
      WBPaper00038237:age-1_upregulated_neuron_rescue
      WBPaper00038237:age-1_upregulated_nontransgenic
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045571:germline-ablation_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00046887:WNT-target
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00047132:glp-1(ts)-25C_upregulated
      WBPaper00048690:hermaphrodite-Z1-Z4_enriched
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:HeatShock_upregulated_hsf-1(+)
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00053814:15C_downregulated_PY79
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055013:hmg-4(RNAi)_upregulated
      WBPaper00055049:S.gordonii_downregulated
      WBPaper00055060:flr-1(RNAi)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056034:pals-25(jy9)_downregulated
      WBPaper00056284:ints-6(t1903)_upregulated
      WBPaper00056443:DietaryRestriction_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00058711:paraquat_upregulated
      WBPaper00058711:wdr-5(ok1417)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058948:PA14_upregulated
      WBPaper00059231:alh-6(lax105)_L4_downregulated
      WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059739:hira-1(gk835598)_downregulated_adult
      WBPaper00059739:hira-1(gk835598)_upregulated_L4
      WBPaper00059816:crh-1(n3315)_downrgulated
      WBPaper00059987:Wounding_downregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060278:atp-2(RNAi)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060911:prx-5(RNAi)_downregulated_mRNA
      WBPaper00060921:cat-2(e1112)_downregulated
      WBPaper00060921:tdc-1(n3419)_downregulated
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:W01F3.2_1554-Y106G6D.8
      WBPaper00062184:PA14_downregulated
      WBPaper00062193:hsf-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064156:lipl-4(overexpress)_downregulated
      WBPaper00064494:postdauer_downregulated_AWA
      WBPaper00064505:tamoxifen_downregulated
      WBPaper00064727:daf-2(e1370)_upregulated
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00065272:dhgd-1(tm6671)_downregulated
      WBPaper00065373:sek-1(km4)_downregulated_cisplatin
      WBPaper00065373:sek-1(km4)_downregulated_Ref
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065835:Day11_vs_Day1_downregulated
      WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
      WBPaper00065841:2_0
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4386_cluster_2_6
      WBPaper00028789:PA14_vs_gacA_downregulated_8hr
      WBPaper00028789:PA14_vs_OP50_downregulated_8hr
      WBPaper00036286:Pattern_D
      WBPaper00036464:S.aureus-RN6390_regulated
      WBPaper00037695:LD_3-day
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:crh-1null_up_regulated
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
      WBPaper00040821:Au-NP_regulated
      WBPaper00040823:alg-1(gk214)_upregulated
      WBPaper00041002:HQ_3d_2.0mM_Down
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041906:I-4317_vs_OP50_10d
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00044535:male_downregulated
      WBPaper00045015:nhr-25(RNAi)_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00055899:nitroguanidine_regulated
    Interaction: WBInteraction000112675
      WBInteraction000549461
      WBInteraction000549462
      WBInteraction000580892
  Map_info: Positive: Positive_clone: B0454 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -8.93612
  Method: Gene