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WormBase Tree Display for CDS: ZK669.4

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Name Class

ZK669.4EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceZK669
StructureSource_exons173
120195
277387
696778
10161237
12881352
13981682
17621953
20032104
21612298
DB_infoDatabaseKEGGKEGG_id2.3.1.168
SwissProtUniProtAccQ23571
UniProtUniProtAccQ23571
UniProt_GCRPUniProtAccQ23571
AlphaFoldentryQ23571
NCBI_proteinGI_numberGI:3881757
TREEFAMTREEFAM_IDTF314182
Protein_idCHROMOSOME_IICAA854651
DB_remarkDBT-1 protein; contains similarity to Pfam domains PF00198 (2-oxoacid dehydrogenases acyltransferase (catalytic domain)), PF00364 (Biotin-requiring enzyme), PF02817 (e3 binding domain); contains similarity to Interpro domains IPR004167 (Peripheral subunit-binding domain), IPR000089 (Biotin/lipoyl attachment), IPR036625 (E3-binding domain superfamily), IPR011053 (Single hybrid motif), IPR001078 (2-oxoacid dehydrogenase acyltransferase, catalytic domain), IPR023213 (Chloramphenicol acetyltransferase-like domain superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00014054
Corresponding_transcriptZK669.4.1
Corresponding_proteinCE01115
Corresponding_PCR_productcenix:58-b4
mv_ZK669.4
sjj2_ZK669.4.1
sjj_ZK669.4
Corresponding_oligo_set (14)
Matching_cDNA (107)
RNAi_resultWBRNAi00112091
WBRNAi00112089
WBRNAi00038407
WBRNAi00112092
WBRNAi00106981
WBRNAi00112090
WBRNAi00059639
Microarray_results (15)
Brief_identificationLipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrialAccession_evidenceUniProtSP:Q23571
RNASeq_FPKM (74)
Associated_featureWBsf000335
Methodcurated