WormBase Tree Display for CDS: ZK669.4
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ZK669.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK669 | |||
Structure | Source_exons | 1 | 73 | |||
120 | 195 | |||||
277 | 387 | |||||
696 | 778 | |||||
1016 | 1237 | |||||
1288 | 1352 | |||||
1398 | 1682 | |||||
1762 | 1953 | |||||
2003 | 2104 | |||||
2161 | 2298 | |||||
DB_info | Database | KEGG | KEGG_id | 2.3.1.168 | ||
SwissProt | UniProtAcc | Q23571 | ||||
UniProt | UniProtAcc | Q23571 | ||||
UniProt_GCRP | UniProtAcc | Q23571 | ||||
AlphaFold | entry | Q23571 | ||||
NCBI_protein | GI_number | GI:3881757 | ||||
TREEFAM | TREEFAM_ID | TF314182 | ||||
Protein_id | CHROMOSOME_II | CAA85465 | 1 | |||
DB_remark | DBT-1 protein; contains similarity to Pfam domains PF00198 (2-oxoacid dehydrogenases acyltransferase (catalytic domain)), PF00364 (Biotin-requiring enzyme), PF02817 (e3 binding domain); contains similarity to Interpro domains IPR004167 (Peripheral subunit-binding domain), IPR000089 (Biotin/lipoyl attachment), IPR036625 (E3-binding domain superfamily), IPR011053 (Single hybrid motif), IPR001078 (2-oxoacid dehydrogenase acyltransferase, catalytic domain), IPR023213 (Chloramphenicol acetyltransferase-like domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00014054 | ||||
Corresponding_transcript | ZK669.4.1 | |||||
Corresponding_protein | CE01115 | |||||
Corresponding_PCR_product | cenix:58-b4 | |||||
mv_ZK669.4 | ||||||
sjj2_ZK669.4.1 | ||||||
sjj_ZK669.4 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (107) | ||||||
RNAi_result | WBRNAi00112091 | |||||
WBRNAi00112089 | ||||||
WBRNAi00038407 | ||||||
WBRNAi00112092 | ||||||
WBRNAi00106981 | ||||||
WBRNAi00112090 | ||||||
WBRNAi00059639 | ||||||
Microarray_results (15) | ||||||
Brief_identification | Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial | Accession_evidence | UniProt | SP:Q23571 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf000335 | |||||
Method | curated |