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WormBase Tree Display for CDS: ZC513.8

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Name Class

ZC513.8EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceZC513
StructureSource_exons1165
236755
8141040
DB_infoDatabaseTrEMBLUniProtAccG5ED38
UniProtUniProtAccG5ED38
UniProt_GCRPUniProtAccG5ED38
AlphaFoldentryG5ED38
NCBI_proteinGI_numberGI:351049996
Protein_idCHROMOSOME_VCCD640701
DB_remarkCOL-43 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000620
Corresponding_transcriptZC513.8.1
Corresponding_proteinCE07615
Corresponding_PCR_productcenix:172-b4
mv_ZC513.8
sjj_ZC513.8
smd_ZC513.8
Corresponding_oligo_set (15)
Matching_cDNA (46)
RNAi_resultWBRNAi00021744
WBRNAi00038094
WBRNAi00058996
Microarray_results (17)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:G5ED38
RNASeq_FPKM (74)
Methodcurated