WormBase Tree Display for CDS: ZC513.8
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ZC513.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZC513 | |||
Structure | Source_exons | 1 | 165 | |||
236 | 755 | |||||
814 | 1040 | |||||
DB_info | Database | TrEMBL | UniProtAcc | G5ED38 | ||
UniProt | UniProtAcc | G5ED38 | ||||
UniProt_GCRP | UniProtAcc | G5ED38 | ||||
AlphaFold | entry | G5ED38 | ||||
NCBI_protein | GI_number | GI:351049996 | ||||
Protein_id | CHROMOSOME_V | CCD64070 | 1 | |||
DB_remark | COL-43 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000620 | ||||
Corresponding_transcript | ZC513.8.1 | |||||
Corresponding_protein | CE07615 | |||||
Corresponding_PCR_product | cenix:172-b4 | |||||
mv_ZC513.8 | ||||||
sjj_ZC513.8 | ||||||
smd_ZC513.8 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (46) | ||||||
RNAi_result | WBRNAi00021744 | |||||
WBRNAi00038094 | ||||||
WBRNAi00058996 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:G5ED38 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |