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WormBase Tree Display for CDS: Y59E9AR.5

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Name Class

Y59E9AR.5EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY59E9AR
StructureSource_exons1197
247433
4891031
DB_infoDatabaseSwissProtUniProtAccQ9N2K7
UniProtUniProtAccQ9N2K7
UniProt_GCRPUniProtAccQ9N2K7
AlphaFoldentryQ9N2K7
NCBI_proteinGI_numberGI:351062654
Protein_idCHROMOSOME_IVCCD706931
DB_remarkTBX-42 protein; contains similarity to Pfam domain PF00907 (T-box); contains similarity to Interpro domains IPR036960 (T-box superfamily), IPR046360 (T-box transcription factor, DNA-binding domain), IPR008967 (p53-like transcription factor, DNA-binding domain superfamily), IPR001699 (T-box transcription factor)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00022000
Corresponding_transcriptY59E9AR.5.1
Corresponding_proteinCE25515
Corresponding_PCR_productcenix:215-g3
cenix:215-h3
mv_Y59E9AR.3
sjj_Y59E9_120.a
Corresponding_oligo_set (13)
RNAi_resultWBRNAi00057775
WBRNAi00057776
WBRNAi00021177
Microarray_results (18)
Brief_identificationPutative T-box protein 30/42Accession_evidenceUniProtSP:Q9N2K7
RNASeq_FPKM (74)
Last_reviewed03 Oct 2013 00:00:00WBPerson4025
Methodcurated