WormBase Tree Display for CDS: Y55B1AR.1
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| Y55B1AR.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y55B1AR | |||
| Structure | Source_exons | 1 | 324 | |||
| 642 | 758 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9N384 | ||
| UniProt | UniProtAcc | Q9N384 | ||||
| UniProt_GCRP | UniProtAcc | Q9N384 | ||||
| AlphaFold | entry | Q9N384 | ||||
| NCBI_protein | GI_number | GI:351059380 | ||||
| Protein_id | CHROMOSOME_III | CCD73852 | 1 | |||
| DB_remark | LEC-6 protein; contains similarity to Pfam domain PF00337 (Galactoside-binding lectin); contains similarity to Interpro domains IPR044156 (Galectin-like), IPR001079 (Galectin, carbohydrate recognition domain), IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00002269 | ||||
| Corresponding_transcript | Y55B1AR.1.1 | |||||
| Corresponding_protein | CE22493 | |||||
| Corresponding_PCR_product | TH:337H1 | |||||
| cenix:337-h1 | ||||||
| mv_BAA09794 | ||||||
| mv_G_YK7450 | ||||||
| sjj_Y55B1A_120.d | ||||||
| sjj_Y55B1A_120.f | ||||||
| smd_Y55B1A_120.f | ||||||
| Corresponding_oligo_set (21) | ||||||
| Matching_cDNA (160) | ||||||
| RNAi_result | WBRNAi00021003 | |||||
| WBRNAi00110600 | ||||||
| WBRNAi00033545 | ||||||
| WBRNAi00057496 | ||||||
| WBRNAi00021005 | ||||||
| WBRNAi00062454 | ||||||
| WBRNAi00007108 | ||||||
| WBRNAi00061941 | ||||||
| Microarray_results (25) | ||||||
| Brief_identification | Galectin | Accession_evidence | UniProt | TR:Q9N384 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf000354 | |||||
| Method | curated |
