WormBase Tree Display for CDS: Y54G11B.1
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| Y54G11B.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_II | |||
| Structure | Source_exons | 1 | 83 | |||
| 179 | 350 | |||||
| 400 | 596 | |||||
| 650 | 851 | |||||
| 1530 | 1728 | |||||
| 1780 | 1936 | |||||
| 2169 | 2343 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G5EGR5 | ||
| UniProt | UniProtAcc | G5EGR5 | ||||
| UniProt_GCRP | UniProtAcc | G5EGR5 | ||||
| AlphaFold | entry | G5EGR5 | ||||
| NCBI_protein | GI_number | GI:3881137 | ||||
| TREEFAM | TREEFAM_ID | TF315509 | ||||
| Protein_id | CHROMOSOME_II | CAA15983 | 1 | |||
| DB_remark | DMSR-6 protein; contains similarity to Pfam domain PF10324 (Serpentine type 7TM GPCR chemoreceptor Srw); contains similarity to Interpro domains IPR019427 (7TM GPCR, serpentine receptor class w (Srw)), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00013222 | ||||
| Corresponding_transcript | Y54G11B.1.1 | |||||
| Y54G11B.1.2 | ||||||
| Corresponding_protein | CE16663 | |||||
| Corresponding_PCR_product | cenix:102-d1 | |||||
| mv_Y54G11B.1 | ||||||
| sjj_Y54G11B.1 | ||||||
| sjj_Y54G11B.a | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (20) | ||||||
| RNAi_result | WBRNAi00037490 | |||||
| WBRNAi00020991 | ||||||
| WBRNAi00020992 | ||||||
| WBRNAi00057435 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | G-protein coupled receptors family 1 profile domain-containing protein | Accession_evidence | UniProt | TR:G5EGR5 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf019580 | |||||
| Method | curated |
