WormBase Tree Display for CDS: Y47H9C.1
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| Y47H9C.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y47H9C | |||
| Structure | Source_exons | 1 | 203 | |||
| 708 | 865 | |||||
| 909 | 1244 | |||||
| 1290 | 1426 | |||||
| 1790 | 1985 | |||||
| 2039 | 2142 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XWE2 | ||
| UniProt | UniProtAcc | Q9XWE2 | ||||
| UniProt_GCRP | UniProtAcc | Q9XWE2 | ||||
| AlphaFold | entry | Q9XWE2 | ||||
| NCBI_protein | GI_number | GI:3881073 | ||||
| TREEFAM | TREEFAM_ID | TF315857 | ||||
| Protein_id | CHROMOSOME_I | CAA21732 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03409 (Transmembrane glycoprotein); contains similarity to Interpro domain IPR005071 (Transmembrane glycoprotein) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00012947 | ||||
| Corresponding_transcript | Y47H9C.1.1 | |||||
| Corresponding_protein | CE20262 | |||||
| Corresponding_PCR_product | cenix:99-a6 | |||||
| mv_Y47H9C.1 | ||||||
| sjj_Y47H9C.1 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA (20) | ||||||
| RNAi_result | WBRNAi00037204 | |||||
| WBRNAi00004661 | ||||||
| WBRNAi00056838 | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | CUB_2 domain-containing protein | Accession_evidence | UniProt | TR:Q9XWE2 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
