WormBase Tree Display for CDS: Y47G6A.8
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Y47G6A.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y47G6A | |||
Structure | Source_exons | 1 | 90 | |||
435 | 1142 | |||||
1934 | 2085 | |||||
2138 | 2336 | |||||
DB_info | Database | KEGG | KEGG_id | 3.1.-.- | ||
SwissProt | UniProtAcc | Q9N3T2 | ||||
UniProt | UniProtAcc | Q9N3T2 | ||||
UniProt_GCRP | UniProtAcc | Q9N3T2 | ||||
AlphaFold | entry | Q9N3T2 | ||||
NCBI_protein | GI_number | GI:373220153 | ||||
TREEFAM | TREEFAM_ID | TF105701 | ||||
Protein_id | CHROMOSOME_I | CCD72553 | 1 | |||
DB_remark | CRN-1 protein; contains similarity to Pfam domains PF00752 (XPG N-terminal domain), PF00867 (XPG I-region); contains similarity to Interpro domains IPR036279 (5'-3' exonuclease, C-terminal domain superfamily), IPR006086 (XPG-I domain), IPR029060 (PIN-like domain superfamily), IPR006084 (XPG/Rad2 endonuclease), IPR006085 (XPG, N-terminal), IPR008918 (Helix-hairpin-helix motif, class 2) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000794 | ||||
Corresponding_transcript | Y47G6A.8.1 | |||||
Corresponding_protein | CE22109 | |||||
Corresponding_PCR_product | cenix:72-e11 | |||||
mv_Y47G6A.8 | ||||||
sjj_Y47G6A_247.i | ||||||
Corresponding_oligo_set (19) | ||||||
Matching_cDNA (65) | ||||||
RNAi_result (51) | ||||||
Microarray_results (20) | ||||||
Brief_identification | Flap endonuclease 1 | Accession_evidence | UniProt | SP:Q9N3T2 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf123164 | |||||
Method | curated |