WormBase Tree Display for CDS: Y40B1B.7
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| Y40B1B.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y40B1B | |||
| Structure | Source_exons | 1 | 80 | |||
| 130 | 331 | |||||
| 1842 | 1931 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XWP4 | ||
| UniProt | UniProtAcc | Q9XWP4 | ||||
| UniProt_GCRP | UniProtAcc | Q9XWP4 | ||||
| AlphaFold | entry | Q9XWP4 | ||||
| NCBI_protein | GI_number | GI:3880910 | ||||
| Protein_id | CHROMOSOME_I | CAA21606 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03879 (Cgr1 family); contains similarity to Interpro domains IPR026570 (Coiled-coil domain-containing protein 86), IPR005579 (Cgr1-like) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00012739 | ||||
| Corresponding_transcript | Y40B1B.7.1 | |||||
| Corresponding_protein | CE21790 | |||||
| Corresponding_PCR_product | cenix:168-f11 | |||||
| mv_Y40B1B.7 | ||||||
| sjj_Y40B1B.7 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (37) | ||||||
| RNAi_result | WBRNAi00097254 | |||||
| WBRNAi00056321 | ||||||
| WBRNAi00097299 | ||||||
| WBRNAi00036978 | ||||||
| WBRNAi00097344 | ||||||
| WBRNAi00026686 | ||||||
| WBRNAi00097209 | ||||||
| WBRNAi00002082 | ||||||
| WBRNAi00026687 | ||||||
| WBRNAi00004612 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Coiled-coil domain-containing protein 86 | Accession_evidence | UniProt | TR:Q9XWP4 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf016018 | |||||
| Method | curated |
