WormBase Tree Display for CDS: Y113G7B.7
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| Y113G7B.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y113G7B | |||
| Structure | Source_exons | 1 | 41 | |||
| 110 | 187 | |||||
| 238 | 874 | |||||
| 922 | 1110 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9U2X6 | ||
| UniProt | UniProtAcc | Q9U2X6 | ||||
| UniProt_GCRP | UniProtAcc | Q9U2X6 | ||||
| AlphaFold | entry | Q9U2X6 | ||||
| NCBI_protein | GI_number | GI:5824695 | ||||
| TREEFAM | TREEFAM_ID | TF322006 | ||||
| Protein_id | CHROMOSOME_V | CAB54329 | 1 | |||
| DB_remark | FBXA-114 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00013758 | ||||
| Corresponding_transcript | Y113G7B.7.1 | |||||
| Corresponding_protein | CE23289 | |||||
| Corresponding_PCR_product | cenix:131-f11 | |||||
| mv_Y113G7B.7 | ||||||
| sjj_Y113G7B.7 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (23) | ||||||
| RNAi_result | WBRNAi00055409 | |||||
| WBRNAi00019900 | ||||||
| WBRNAi00081082 | ||||||
| WBRNAi00036594 | ||||||
| WBRNAi00062417 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:Q9U2X6 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf131089 | |||||
| Method | curated |
