WormBase Tree Display for Gene: WBGene00013758

WBGene00013758 SMap: S_parent: Sequence: Y113G7B
  Identity: Version: 2
    Name: CGC_name: fbxa-114 Person_evidence: WBPerson655
      Sequence_name: Y113G7B.7
      Molecular_name: Y113G7B.7
        Y113G7B.7.1
        CE23289
      Other_name: CELE_Y113G7B.7 Accession_evidence: NDB BX284605
      Public_name: fbxa-114
    DB_info: Database: AceView gene 5U671
        WormQTL gene WBGene00013758
        WormFlux gene WBGene00013758
        NDB locus_tag CELE_Y113G7B.7
        Panther gene CAEEL|WormBase=WBGene00013758|UniProtKB=Q9U2X6
          family PTHR23015
        NCBI gene 190972
        RefSeq protein NM_075496.5
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9U2X6
        UniProt_GCRP UniProtAcc Q9U2X6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-114
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (108)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5504
    Ortholog (17)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in germ line; germline precursor cell; head mesodermal cell; intestine; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including glp-1; eat-2; and elt-2 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; metformin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y113G7B.7
    Corresponding_transcript: Y113G7B.7.1
  Experimental_info: RNAi_result: WBRNAi00055409 Inferred_automatically: RNAi_primary
      WBRNAi00019900 Inferred_automatically: RNAi_primary
      WBRNAi00081082 Inferred_automatically: RNAi_primary
      WBRNAi00036594 Inferred_automatically: RNAi_primary
      WBRNAi00062417 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024237
      Expr1158924
      Expr2011460
      Expr2029698
    Microarray_results (15)
    Expression_cluster (104)
    Interaction (33)
  Map_info: Map: V Position: 24.9294 Error: 0.003417
    Positive: Positive_clone: Y113G7B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
    WBPaper00034662
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene