WormBase Tree Display for CDS: W03A3.1
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| W03A3.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | W03A3 | |||
| Structure | Source_exons | 1 | 105 | |||
| 151 | 286 | |||||
| 334 | 635 | |||||
| 1003 | 1186 | |||||
| 1670 | 1977 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P41935 | ||
| UniProt | UniProtAcc | P41935 | ||||
| UniProt_GCRP | UniProtAcc | P41935 | ||||
| AlphaFold | entry | P41935 | ||||
| NCBI_protein | GI_number | GI:373220424 | ||||
| TREEFAM | TREEFAM_ID | TF350743 | ||||
| Protein_id | CHROMOSOME_III | CCD73324 | 1 | |||
| DB_remark | CEH-10 protein; contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000435 | ||||
| Corresponding_transcript | W03A3.1.1 | |||||
| Corresponding_protein | CE07563 | |||||
| Corresponding_PCR_product | TH:306A7 | |||||
| cenix:306-a7 | ||||||
| mv_AAA93063 | ||||||
| sjj_W03A3.1 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA | adult_Nanopore_Roach_43219 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_18781 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_96353 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_74935 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR153C4_1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_317525 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_313212 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_275928 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF153C4_1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_361257 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00084771 | |||||
| WBRNAi00027655 | ||||||
| WBRNAi00075607 | ||||||
| WBRNAi00019528 | ||||||
| WBRNAi00054638 | ||||||
| WBRNAi00084769 | ||||||
| WBRNAi00005463 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Homeobox protein ceh-10 | Accession_evidence | UniProt | SP:P41935 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
