WormBase Tree Display for CDS: T20G5.12
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T20G5.12 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T20G5 | |||
Structure | Source_exons | 1 | 240 | |||
329 | 424 | |||||
481 | 573 | |||||
620 | 738 | |||||
804 | 906 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O18095 | ||
UniProt | UniProtAcc | O18095 | ||||
UniProt_GCRP | UniProtAcc | O18095 | ||||
AlphaFold | entry | O18095 | ||||
NCBI_protein | GI_number | GI:2414294 | ||||
TREEFAM | TREEFAM_ID | TF315483 | ||||
Protein_id | CHROMOSOME_III | CAA83014 | 1 | |||
DB_remark | contains similarity to Pfam domain PF01682 (DB module); contains similarity to Interpro domain IPR002602 (Domain of unknown function DB) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00011873 | ||||
Corresponding_transcript | T20G5.12.1 | |||||
Corresponding_protein | CE13854 | |||||
Corresponding_PCR_product | TH:323A4 | |||||
cenix:223-c1 | ||||||
cenix:323-a4 | ||||||
mv_T20G5.12 | ||||||
sjj_T20G5.12 | ||||||
smd_T20G5.12 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA | male_Nanopore_Roach_126850 | |||||
L3_Nanopore_Roach_78729 | ||||||
OSTF047F11_1 | Inferred_automatically | transcript_builder.pl | ||||
OSTR047F11_1 | Inferred_automatically | transcript_builder.pl | ||||
L1_Nanopore_Li_272432 | Inferred_automatically | transcript_builder.pl | ||||
EM_Nanopore_Li_313256 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00053659 | |||||
WBRNAi00092987 | ||||||
WBRNAi00018928 | ||||||
WBRNAi00053660 | ||||||
WBRNAi00035722 | ||||||
WBRNAi00006184 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Domain of unknown function DB domain-containing protein | Accession_evidence | UniProt | TR:O18095 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |