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WormBase Tree Display for CDS: T20G5.12

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Name Class

T20G5.12EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceT20G5
StructureSource_exons1240
329424
481573
620738
804906
DB_infoDatabaseTrEMBLUniProtAccO18095
UniProtUniProtAccO18095
UniProt_GCRPUniProtAccO18095
AlphaFoldentryO18095
NCBI_proteinGI_numberGI:2414294
TREEFAMTREEFAM_IDTF315483
Protein_idCHROMOSOME_IIICAA830141
DB_remarkcontains similarity to Pfam domain PF01682 (DB module); contains similarity to Interpro domain IPR002602 (Domain of unknown function DB)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00011873
Corresponding_transcriptT20G5.12.1
Corresponding_proteinCE13854
Corresponding_PCR_productTH:323A4
cenix:223-c1
cenix:323-a4
mv_T20G5.12
sjj_T20G5.12
smd_T20G5.12
Corresponding_oligo_set (16)
Matching_cDNAmale_Nanopore_Roach_126850
L3_Nanopore_Roach_78729
OSTF047F11_1Inferred_automaticallytranscript_builder.pl
OSTR047F11_1Inferred_automaticallytranscript_builder.pl
L1_Nanopore_Li_272432Inferred_automaticallytranscript_builder.pl
EM_Nanopore_Li_313256Inferred_automaticallytranscript_builder.pl
RNAi_resultWBRNAi00053659
WBRNAi00092987
WBRNAi00018928
WBRNAi00053660
WBRNAi00035722
WBRNAi00006184
Microarray_results (17)
Brief_identificationDomain of unknown function DB domain-containing proteinAccession_evidenceUniProtTR:O18095
RNASeq_FPKM (74)
Methodcurated