WormBase Tree Display for CDS: T20F5.2
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| T20F5.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T20F5 | |||
| Structure | Source_exons | 1 | 103 | |||
| 153 | 448 | |||||
| 499 | 565 | |||||
| 621 | 763 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P91477 | ||
| UniProt | UniProtAcc | P91477 | ||||
| UniProt_GCRP | UniProtAcc | P91477 | ||||
| AlphaFold | entry | P91477 | ||||
| NCBI_protein | GI_number | GI:351060149 | ||||
| TREEFAM | TREEFAM_ID | TF106219 | ||||
| Protein_id | CHROMOSOME_I | CCD67779 | 1 | |||
| DB_remark | PBS-4 protein; contains similarity to Pfam domain PF00227 (Proteasome subunit); contains similarity to Interpro domains IPR001353 (Proteasome, subunit alpha/beta), IPR023333 (Proteasome B-type subunit), IPR029055 (Nucleophile aminohydrolases, N-terminal) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00003950 | ||||
| Corresponding_transcript | T20F5.2.1 | |||||
| Corresponding_protein | CE13818 | |||||
| Corresponding_PCR_product | WBPaper00038381:T20F5_1.1 | |||||
| cenix:122-a4 | ||||||
| mv_T20F5.2 | ||||||
| sjj_T20F5.2 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (64) | ||||||
| RNAi_result (20) | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Proteasome subunit beta type-2 | Accession_evidence | UniProt | SP:P91477 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf008188 | |||||
| Method | curated |
