WormBase Tree Display for CDS: T16G1.8
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| T16G1.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T16G1 | |||
| Structure | Source_exons | 1 | 240 | |||
| 413 | 654 | |||||
| 698 | 764 | |||||
| 812 | 900 | |||||
| 1108 | 1184 | |||||
| 1231 | 1613 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XUP5 | ||
| UniProt | UniProtAcc | Q9XUP5 | ||||
| UniProt_GCRP | UniProtAcc | Q9XUP5 | ||||
| AlphaFold | entry | Q9XUP5 | ||||
| NCBI_protein | GI_number | GI:3879849 | ||||
| TREEFAM | TREEFAM_ID | TF316573 | ||||
| Protein_id | CHROMOSOME_V | CAB04730 | 1 | |||
| DB_remark | GRL-2 protein; contains similarity to Pfam domain PF04155 (Ground-like domain); contains similarity to Interpro domain IPR007284 (Ground-like domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00001711 | ||||
| Corresponding_transcript | T16G1.8.1 | |||||
| Corresponding_protein | CE20078 | |||||
| Corresponding_PCR_product | cenix:150-c6 | |||||
| mv_T16G1.8 | ||||||
| sjj_T16G1.8 | ||||||
| smd_6T16G1.8 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | L3_Nanopore_Roach_82830 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_57160 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR195B12_1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_154642 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG5747|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF195B12_1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_107186 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00018774 | |||||
| WBRNAi00035615 | ||||||
| WBRNAi00053418 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Ground-like domain-containing protein | Accession_evidence | UniProt | TR:Q9XUP5 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
