WormBase Tree Display for CDS: T08D10.1
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T08D10.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_X | |||
Structure | Source_exons | 1 | 192 | |||
479 | 809 | |||||
853 | 945 | |||||
1006 | 1076 | |||||
1133 | 1219 | |||||
1267 | 1351 | |||||
1479 | 1706 | |||||
1783 | 1909 | |||||
1965 | 2199 | |||||
DB_info | Database | SwissProt | UniProtAcc | G5EEG1 | ||
UniProt | UniProtAcc | G5EEG1 | ||||
UniProt_GCRP | UniProtAcc | G5EEG1 | ||||
AlphaFold | entry | G5EEG1 | ||||
NCBI_protein | GI_number | GI:3879640 | ||||
TREEFAM | TREEFAM_ID | TF322779 | ||||
Protein_id | CHROMOSOME_X | CAA90639 | 1 | |||
DB_remark | NFYA-1 protein; contains similarity to Pfam domain PF02045 (CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B); contains similarity to Interpro domain IPR001289 (Nuclear transcription factor Y subunit A) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00011614 | ||||
Corresponding_transcript | T08D10.1.1 | |||||
Corresponding_protein | CE03642 | |||||
Corresponding_PCR_product | cenix:56-e5 | |||||
mv_T08D10.1 | ||||||
sjj2_T08D10.1 | ||||||
sjj_T08D10.1 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (28) | ||||||
RNAi_result | WBRNAi00052856 | |||||
WBRNAi00115869 | ||||||
WBRNAi00116062 | ||||||
WBRNAi00035349 | ||||||
WBRNAi00018436 | ||||||
Microarray_results (15) | ||||||
Brief_identification | Nuclear transcription factor Y subunit nfya-1 | Accession_evidence | UniProt | SP:G5EEG1 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |