WormBase Tree Display for CDS: T06C12.4
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T06C12.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T06C12 | |||
Structure | Source_exons | 1 | 197 | |||
279 | 951 | |||||
996 | 1244 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O18043 | ||
UniProt | UniProtAcc | O18043 | ||||
UniProt_GCRP | UniProtAcc | O18043 | ||||
AlphaFold | entry | O18043 | ||||
NCBI_protein | GI_number | GI:3879614 | ||||
TREEFAM | TREEFAM_ID | TF321294 | ||||
Protein_id | CHROMOSOME_V | CAB03304 | 1 | |||
DB_remark | FBXA-197 protein; contains similarity to Pfam domains PF01827 (FTH domain), PF17906 (HTH domain in Mos1 transposase); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR041426 (Mos1 transposase, HTH domain), IPR040161 (F-box A protein FB224) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00011513 | ||||
Corresponding_transcript | T06C12.4.1 | |||||
Corresponding_protein | CE16354 | |||||
Corresponding_PCR_product | cenix:98-e7 | |||||
mv_T06C12.4 | ||||||
sjj_T06C12.4 | ||||||
Corresponding_oligo_set (13) | ||||||
Matching_cDNA (16) | ||||||
RNAi_result | WBRNAi00052628 | |||||
WBRNAi00062357 | ||||||
WBRNAi00035257 | ||||||
WBRNAi00018281 | ||||||
Microarray_results (14) | ||||||
Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:O18043 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |