WormBase Tree Display for CDS: T01G9.5a
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T01G9.5a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T01G9 | |||
Structure | Source_exons | 1 | 177 | |||
228 | 566 | |||||
613 | 1340 | |||||
1669 | 1843 | |||||
DB_info | Database | KEGG | KEGG_id | 5.6.1.1 | ||
SwissProt | UniProtAcc | P34808 | ||||
UniProtIsoformAcc | P34808-1 | |||||
UniProt | UniProtAcc | P34808 | ||||
UniProt_GCRP | UniProtAcc | P34808 | ||||
AlphaFold | entry | P34808 | ||||
NCBI_protein | GI_number | GI:3879272 | ||||
Protein_id | CHROMOSOME_I | CAB00052 | 1 | |||
DB_remark | MEI-1 protein; contains similarity to Pfam domains PF00004 (ATPase family associated with various cellular activities (AAA)), PF17862 (AAA+ lid domain); contains similarity to Interpro domains IPR003959 (ATPase, AAA-type, core), IPR041569 (AAA ATPase, AAA+ lid domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003593 (AAA+ ATPase domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | NDB | CK577195 | |||
Inferred_automatically | transcript_builder | |||||
Visible | Gene | WBGene00003183 | ||||
Corresponding_transcript | T01G9.5a.1 | |||||
Corresponding_protein | CE06342 | |||||
Corresponding_PCR_product | cenix:11-h4 | |||||
mv_AAA28109 | ||||||
sjj_T01G9.5 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (75) | ||||||
RNAi_result (30) | ||||||
Microarray_results (22) | ||||||
Brief_identification | Meiotic spindle formation protein mei-1 | Accession_evidence | UniProt | SP:P34808 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf009507 | |||||
Method | curated |