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WormBase Tree Display for CDS: PPA21659

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Name Class

PPA21659SMapS_parentSequencePPA_ChrI
StructureSource_exons (36)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-6.51
DB_remarkPPA-CGEF-1 protein; contains similarity to Pfam domains PF00621 (RhoGEF domain), PF13716 (Divergent CRAL/TRIO domain); contains similarity to Interpro domains IPR001251 (CRAL-TRIO lipid binding domain), IPR000219 (Dbl homology (DH) domain), IPR035899 (Dbl homology (DH) domain superfamily), IPR011993 (PH-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00111213
Corresponding_transcriptPPA21659.1
Corresponding_proteinPP60287
Corresponding_oligo_setGPL14372_Probes_24448
GPL14372_Probes_24450
GPL14372_Probes_24451
GPL14372_Probes_24452
GPL14372_Probes_24453
GPL14372_Probes_24454
GPL14372_Probes_24456
GPL14372_Probes_77604
GPL14372_Probes_77605
GPL14372_Probes_77606
Microarray_resultsGPL14372_Probes_24448
GPL14372_Probes_24450
GPL14372_Probes_24451
GPL14372_Probes_24452
GPL14372_Probes_24453
GPL14372_Probes_24454
GPL14372_Probes_24456
GPL14372_Probes_77604
GPL14372_Probes_77605
GPL14372_Probes_77606
RNASeq_FPKMWBls:00000320.993633From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.34684From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-6.51Curator_confirmedWBPerson4055
Methodcurated