WormBase Tree Display for CDS: M28.5
expand all nodes | collapse all nodes | view schema
M28.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | M28 | |||
Structure | Source_exons | 1 | 156 | |||
237 | 467 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q21568 | ||
UniProt | UniProtAcc | Q21568 | ||||
UniProt_GCRP | UniProtAcc | Q21568 | ||||
AlphaFold | entry | Q21568 | ||||
NCBI_protein | GI_number | GI:3878691 | ||||
TREEFAM | TREEFAM_ID | TF300184 | ||||
Protein_id | CHROMOSOME_II | CAA90127 | 1 | |||
DB_remark | SNU-13 protein; contains similarity to Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family); contains similarity to Interpro domains IPR018492 (Ribosomal protein eL8/Nhp2 family), IPR029064 (Ribosomal protein eL30-like superfamily), IPR004038 (Ribosomal protein eL8/eL30/eS12/Gadd45), IPR002415 (H/ACA ribonucleoprotein complex, subunit Nhp2-like) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00010896 | ||||
Corresponding_transcript | M28.5.1 | |||||
Corresponding_protein | CE02283 | |||||
Corresponding_PCR_product | cenix:210-f11 | |||||
mv_G_YK2227 | ||||||
sjj_M28.5 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (184) | ||||||
RNAi_result (11) | ||||||
Microarray_results (19) | ||||||
Brief_identification | NHP2-like protein 1 homolog | Accession_evidence | UniProt | SP:Q21568 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf001658 | |||||
Method | curated |