WormBase Tree Display for CDS: M195.1
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M195.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | M195 | |||
Structure | Source_exons | 1 | 80 | |||
133 | 217 | |||||
296 | 1045 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q21562 | ||
UniProt | UniProtAcc | Q21562 | ||||
UniProt_GCRP | UniProtAcc | Q21562 | ||||
AlphaFold | entry | Q21562 | ||||
NCBI_protein | GI_number | GI:3878726 | ||||
Protein_id | CHROMOSOME_II | CAA91290 | 1 | |||
DB_remark | COL-77 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000653 | ||||
Corresponding_transcript | M195.1.1 | |||||
Corresponding_protein | CE03514 | |||||
Corresponding_PCR_product | cenix:128-g10 | |||||
mv_M195.1 | ||||||
sjj_M195.1 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (123) | ||||||
RNAi_result | WBRNAi00017242 | |||||
WBRNAi00098897 | ||||||
WBRNAi00098899 | ||||||
WBRNAi00091337 | ||||||
WBRNAi00098900 | ||||||
WBRNAi00007445 | ||||||
WBRNAi00051011 | ||||||
WBRNAi00034471 | ||||||
Microarray_results (16) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q21562 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |