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WormBase Tree Display for CDS: M195.1

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Name Class

M195.1EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceM195
StructureSource_exons180
133217
2961045
DB_infoDatabaseTrEMBLUniProtAccQ21562
UniProtUniProtAccQ21562
UniProt_GCRPUniProtAccQ21562
AlphaFoldentryQ21562
NCBI_proteinGI_numberGI:3878726
Protein_idCHROMOSOME_IICAA912901
DB_remarkCOL-77 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000653
Corresponding_transcriptM195.1.1
Corresponding_proteinCE03514
Corresponding_PCR_productcenix:128-g10
mv_M195.1
sjj_M195.1
Corresponding_oligo_set (15)
Matching_cDNA (123)
RNAi_resultWBRNAi00017242
WBRNAi00098897
WBRNAi00098899
WBRNAi00091337
WBRNAi00098900
WBRNAi00007445
WBRNAi00051011
WBRNAi00034471
Microarray_results (16)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q21562
RNASeq_FPKM (74)
Methodcurated