WormBase Tree Display for CDS: M03A8.1
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M03A8.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | M03A8 | |||
Structure | Source_exons | 1 | 274 | |||
324 | 392 | |||||
440 | 711 | |||||
754 | 1219 | |||||
1266 | 1399 | |||||
1450 | 1545 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q21481 | ||
UniProt | UniProtAcc | Q21481 | ||||
UniProt_GCRP | UniProtAcc | Q21481 | ||||
AlphaFold | entry | Q21481 | ||||
NCBI_protein | GI_number | GI:373254413 | ||||
TREEFAM | TREEFAM_ID | TF105656 | ||||
Protein_id | CHROMOSOME_X | CCD70982 | 1 | |||
DB_remark | DHS-28 protein; contains similarity to Pfam domains PF00106 (short chain dehydrogenase), PF02036 (SCP-2 sterol transfer family); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR), IPR003033 (SCP2 sterol-binding domain), IPR036527 (SCP2 sterol-binding domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000991 | ||||
Corresponding_transcript | M03A8.1.1 | |||||
Corresponding_protein | CE04770 | |||||
Corresponding_PCR_product | cenix:25-c5 | |||||
mv_M03A8.1 | ||||||
sjj_M03A8.1 | ||||||
Corresponding_oligo_set (25) | ||||||
Matching_cDNA (113) | ||||||
RNAi_result | WBRNAi00108444 | |||||
WBRNAi00008998 | ||||||
WBRNAi00050847 | ||||||
WBRNAi00034393 | ||||||
WBRNAi00025981 | ||||||
WBRNAi00092604 | ||||||
Microarray_results (26) | ||||||
Brief_identification | SCP2 domain-containing protein | Accession_evidence | UniProt | TR:Q21481 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf004420 | |||||
Method | curated |