WormBase Tree Display for CDS: K09F6.8
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| K09F6.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K09F6 | |||
| Structure | Source_exons | 1 | 77 | |||
| 131 | 1123 | |||||
| 1264 | 1411 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O16735 | ||
| UniProt | UniProtAcc | O16735 | ||||
| UniProt_GCRP | UniProtAcc | O16735 | ||||
| AlphaFold | entry | O16735 | ||||
| NCBI_protein | GI_number | GI:351065662 | ||||
| TREEFAM | TREEFAM_ID | TF322489 | ||||
| Protein_id | CHROMOSOME_II | CCD61655 | 1 | |||
| DB_remark | FBXC-25 protein; contains similarity to Pfam domain PF12078 (Domain of unknown function (DUF3557)); contains similarity to Interpro domain IPR021942 (Protein of unknown function DUF3557) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00019591 | ||||
| Corresponding_transcript | K09F6.8.1 | |||||
| Corresponding_protein | CE12038 | |||||
| Corresponding_PCR_product | cenix:109-b2 | |||||
| mv_K09F6.8 | ||||||
| sjj_K09F6.8 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | adult_Nanopore_Roach_21089 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_191643 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_7106 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_190057 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF107G3_1 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR107G3_1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG3051|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_227144 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_190480 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG3051|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00050452 | |||||
| WBRNAi00016935 | ||||||
| WBRNAi00034218 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | F-box C protein | Accession_evidence | UniProt | TR:O16735 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
