WormBase Tree Display for Gene: WBGene00019591
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| WBGene00019591 | SMap | S_parent | Sequence | K09F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-25 | Person_evidence | WBPerson655 | |||||
| Sequence_name | K09F6.8 | ||||||||
| Molecular_name | K09F6.8 | ||||||||
| K09F6.8.1 | |||||||||
| CE12038 | |||||||||
| Other_name | CELE_K09F6.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-25 | ||||||||
| DB_info | Database | AceView | gene | 2C584 | |||||
| WormQTL | gene | WBGene00019591 | |||||||
| WormFlux | gene | WBGene00019591 | |||||||
| NDB | locus_tag | CELE_K09F6.8 | |||||||
| NCBI | gene | 187235 | |||||||
| RefSeq | protein | NM_061827.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322489 | |||||||
| TrEMBL | UniProtAcc | O16735 | |||||||
| UniProt_GCRP | UniProtAcc | O16735 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-25 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (192) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpapaap; ABalpapppa; ABalppappa; amphid neurons; and pharyngeal cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including hydrogen sulfide; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K09F6.8 | |||||||
| Corresponding_transcript | K09F6.8.1 | ||||||||
| Associated_feature | WBsf649923 | ||||||||
| WBsf222759 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050452 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016935 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034218 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023151 | ||||||||
| Expr1038458 | |||||||||
| Expr1154158 | |||||||||
| Expr2011711 | |||||||||
| Expr2029950 | |||||||||
| Drives_construct | WBCnstr00025747 | ||||||||
| Construct_product | WBCnstr00025747 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction (97) | |||||||||
| Map_info | Map | II | Position | -13.834 | Error | 0.000784 | |||
| Positive | Positive_clone | K09F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
