WormBase Tree Display for CDS: K01G5.5

K01G5.5 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: K01G5
  Structure: Source_exons: 1 48
      107 193
      236 714
      764 1487
  DB_info: Database: KEGG KEGG_id 5.4.99.-
      SwissProt UniProtAcc O17919
      UniProt UniProtAcc O17919
      UniProt_GCRP UniProtAcc O17919
      AlphaFold entry O17919
      NCBI_protein GI_number GI:3924791
      TREEFAM TREEFAM_ID TF300354
    Protein_id: CHROMOSOME_III CAB07244 1
    DB_remark: DKC-1 protein; contains similarity to Pfam domains PF01472 (PUA domain), PF01509 (TruB family pseudouridylate synthase (N terminal domain)), PF08068 (DKCLD (NUC011) domain), PF16198 (tRNA pseudouridylate synthase B C-terminal domain); contains similarity to Interpro domains IPR036974 (PUA domain superfamily), IPR004521 (Uncharacterised domain CHP00451), IPR015947 (PUA-like superfamily), IPR002478 (PUA domain), IPR032819 (tRNA pseudouridylate synthase B, C-terminal), IPR004802 (tRNA pseudouridine synthase B family), IPR002501 (Pseudouridine synthase II, N-terminal), IPR012960 (Dyskerin-like), IPR020103 (Pseudouridine synthase, catalytic domain superfamily)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
  Visible: Gene: WBGene00010478
    Corresponding_transcript: K01G5.5.1
    Corresponding_protein: CE16195
    Corresponding_PCR_product: TH:320C11
      cenix:320-c11
      mv_K01G5.5
      sjj2_K01G5.5.1
      sjj_K01G5.5
    Corresponding_oligo_set (17)
    Matching_cDNA (71)
    RNAi_result: WBRNAi00016410
      WBRNAi00049635
      WBRNAi00002578
      WBRNAi00033832
      WBRNAi00001600
      WBRNAi00007830
    Microarray_results (18)
    Brief_identification: Putative H/ACA ribonucleoprotein complex subunit 4 Accession_evidence: UniProt SP:O17919
    RNASeq_FPKM (74)
  Associated_feature: WBsf001519
    WBsf020564
  Method: curated