WormBase Tree Display for CDS: K01G5.4
expand all nodes | collapse all nodes | view schema
| K01G5.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K01G5 | |||
| Structure | Source_exons | 1 | 118 | |||
| 167 | 292 | |||||
| 340 | 461 | |||||
| 509 | 697 | |||||
| 745 | 837 | |||||
| DB_info | Database | SwissProt | UniProtAcc | O17915 | ||
| UniProt | UniProtAcc | O17915 | ||||
| UniProt_GCRP | UniProtAcc | O17915 | ||||
| AlphaFold | entry | O17915 | ||||
| NCBI_protein | GI_number | GI:3924787 | ||||
| TREEFAM | TREEFAM_ID | TF106302 | ||||
| Protein_id | CHROMOSOME_III | CAB07240 | 1 | |||
| DB_remark | RAN-1 protein; contains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR002041 (Ran GTPase), IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00004302 | ||||
| Corresponding_transcript | K01G5.4.1 | |||||
| Corresponding_protein | CE16194 | |||||
| Corresponding_PCR_product | TH:320b11 | |||||
| TH:341d5 | ||||||
| cenix:320-b11 | ||||||
| cenix:341-d5 | ||||||
| mv_K01G5.4 | ||||||
| sjj_K01G5.4 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (189) | ||||||
| RNAi_result (30) | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | GTP-binding nuclear protein ran-1 | Accession_evidence | UniProt | SP:O17915 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf001793 | |||||
| Method | curated |
