WormBase Tree Display for CDS: F59F5.6
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| F59F5.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F59F5 | |||
| Structure | Source_exons (20) | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q21049 | ||
| UniProt | UniProtAcc | Q21049 | ||||
| UniProt_GCRP | UniProtAcc | Q21049 | ||||
| AlphaFold | entry | Q21049 | ||||
| NCBI_protein | GI_number | GI:3877965 | ||||
| Protein_id | CHROMOSOME_X | CAA90660 | 1 | |||
| DB_remark | SYD-2 protein; contains similarity to Pfam domains PF00536 (SAM domain (Sterile alpha motif)), PF07647 (SAM domain (Sterile alpha motif)); contains similarity to Interpro domains IPR001660 (Sterile alpha motif domain), IPR029515 (LAR-interacting protein, Liprin), IPR013761 (Sterile alpha motif/pointed domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00006364 | ||||
| Corresponding_transcript | F59F5.6.1 | |||||
| F59F5.6.2 | ||||||
| Corresponding_protein | CE03447 | |||||
| Corresponding_PCR_product | cenix:55-g2 | |||||
| mv_AAD47840 | ||||||
| sjj_F59F5.6 | ||||||
| Corresponding_oligo_set (11) | ||||||
| Matching_cDNA (34) | ||||||
| RNAi_result (16) | ||||||
| Microarray_results (13) | ||||||
| Brief_identification | Liprin-alpha | Accession_evidence | UniProt | SP:Q21049 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf027846 | |||||
| Method | curated |
