WormBase Tree Display for CDS: F58A4.10
expand all nodes | collapse all nodes | view schema
| F58A4.10 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F58A4 | |||
| Structure | Source_exons | 1 | 40 | |||
| 96 | 198 | |||||
| 244 | 341 | |||||
| 389 | 567 | |||||
| 615 | 689 | |||||
| DB_info | Database | KEGG | KEGG_id | 2.3.2.23 | ||
| SwissProt | UniProtAcc | P34477 | ||||
| UniProt | UniProtAcc | P34477 | ||||
| UniProt_GCRP | UniProtAcc | P34477 | ||||
| AlphaFold | entry | P34477 | ||||
| NCBI_protein | GI_number | GI:3877825 | ||||
| TREEFAM | TREEFAM_ID | TF101118 | ||||
| Protein_id | CHROMOSOME_III | CAA80166 | 1 | |||
| DB_remark | UBC-7 protein; contains similarity to Pfam domain PF00179 (Ubiquitin-conjugating enzyme); contains similarity to Interpro domains IPR000608 (Ubiquitin-conjugating enzyme E2), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00006704 | ||||
| Corresponding_transcript | F58A4.10.1 | |||||
| Corresponding_protein | CE00216 | |||||
| Corresponding_PCR_product | TH:320E9 | |||||
| cenix:320-e9 | ||||||
| mv_F58A4.10 | ||||||
| sjj_F58A4.10 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (82) | ||||||
| RNAi_result | WBRNAi00076501 | |||||
| WBRNAi00033060 | ||||||
| WBRNAi00094713 | ||||||
| WBRNAi00015931 | ||||||
| WBRNAi00062282 | ||||||
| WBRNAi00082824 | ||||||
| WBRNAi00006023 | ||||||
| WBRNAi00048925 | ||||||
| WBRNAi00002176 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Probable ubiquitin-conjugating enzyme E2 7 | Accession_evidence | UniProt | SP:P34477 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf015164 | |||||
| Method | curated |
