WormBase Tree Display for CDS: F52B5.6
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F52B5.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F52B5 | |||
Structure | Source_exons | 1 | 146 | |||
194 | 386 | |||||
431 | 532 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q20647 | ||
UniProt | UniProtAcc | Q20647 | ||||
UniProt_GCRP | UniProtAcc | Q20647 | ||||
AlphaFold | entry | Q20647 | ||||
NCBI_protein | GI_number | GI:3877409 | ||||
TREEFAM | TREEFAM_ID | TF314116 | ||||
Protein_id | CHROMOSOME_I | CAA99858 | 1 | |||
DB_remark | RPL-25.2 protein; contains similarity to Pfam domains PF00276 (Ribosomal protein L23), PF03939 (Ribosomal protein L23, N-terminal domain); contains similarity to Interpro domains IPR005633 (Large ribosomal subunit protein uL23, N-terminal), IPR013025 (Large ribosomal subunit protein uL23-like), IPR019985 (Large ribosomal subunit protein uL23), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR012678 (Ribosomal protein uL23/eL15/eS24 core domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004439 | ||||
Corresponding_transcript | F52B5.6.1 | |||||
F52B5.6.2 | ||||||
F52B5.6.3 | ||||||
F52B5.6.4 | ||||||
Corresponding_protein | CE05721 | |||||
Corresponding_PCR_product | cenix:122-b3 | |||||
mv_F52B5.6 | ||||||
sjj_F52B5.6 | ||||||
Corresponding_oligo_set (21) | ||||||
Matching_cDNA (219) | ||||||
RNAi_result (17) | ||||||
Microarray_results (26) | ||||||
Brief_identification | Large ribosomal subunit protein uL23B | Accession_evidence | UniProt | SP:Q20647 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf003216 | |||||
Method | curated |