WormBase Tree Display for Gene: WBGene00004439

WBGene00004439 SMap: S_parent: Sequence: F52B5
  Identity: Version: 1
    Name: CGC_name: rpl-25.2
      Sequence_name: F52B5.6
      Molecular_name: F52B5.6
        F52B5.6.1
        CE05721
        F52B5.6.2
        F52B5.6.3
        F52B5.6.4
      Other_name: CELE_F52B5.6 Accession_evidence: NDB BX284601
      Public_name: rpl-25.2
    DB_info: Database: AceView gene 1I906
        WormQTL gene WBGene00004439
        WormFlux gene WBGene00004439
        NDB locus_tag CELE_F52B5.6
        Panther gene CAEEL|WormBase=WBGene00004439|UniProtKB=Q20647
          family PTHR11620
        NCBI gene 172617
        RefSeq protein NM_001383465.2
        SwissProt UniProtAcc Q20647
        TREEFAM TREEFAM_ID TF314116
        UniProt_GCRP UniProtAcc Q20647
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele (15)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl25 using blastP
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (27)
    Paralog: WBGene00004438 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: rpl-25.2 encodes a large ribosomal subunit L23a protein. Curator_confirmed: WBPerson567
          Date_last_updated: 06 Aug 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL23A (ribosomal protein L23a). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F52B5.6
    Corresponding_transcript: F52B5.6.1
      F52B5.6.2
      F52B5.6.3
      F52B5.6.4
    Other_sequence (119)
    Associated_feature: WBsf649383
      WBsf655290
      WBsf663815
      WBsf984407
      WBsf984408
      WBsf219904
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr1025098
      Expr1032243
      Expr1151753
      Expr2015456
      Expr2033691
    Drives_construct: WBCnstr00035485
    Construct_product: WBCnstr00035485
    Antibody: WBAntibody00002469
      WBAntibody00002841
    Microarray_results (26)
    Expression_cluster (155)
    Interaction (272)
  Map_info: Map: I Position: 2.74086 Error: 0.002136
    Positive: Positive_clone: F52B5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004402
    WBPaper00024924
    WBPaper00026593
    WBPaper00028381
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00062604
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene