WormBase Tree Display for CDS: F45D11.16
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F45D11.16 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F45D11 | |||
Structure | Source_exons | 1 | 223 | |||
275 | 328 | |||||
376 | 590 | |||||
644 | 712 | |||||
758 | 883 | |||||
932 | 1060 | |||||
1106 | 1353 | |||||
1398 | 1839 | |||||
DB_info | Database | TrEMBL | UniProtAcc | G5EFS5 | ||
UniProt | UniProtAcc | G5EFS5 | ||||
UniProt_GCRP | UniProtAcc | G5EFS5 | ||||
AlphaFold | entry | G5EFS5 | ||||
NCBI_protein | GI_number | GI:351058674 | ||||
TREEFAM | TREEFAM_ID | TF321359 | ||||
Protein_id | CHROMOSOME_II | CCD66370 | 1 | |||
DB_remark | contains similarity to Pfam domain PF05075 (Protein of unknown function (DUF684)); contains similarity to Interpro domain IPR007767 (Protein of unknown function DUF684) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00018461 | ||||
Corresponding_transcript | F45D11.16.1 | |||||
Corresponding_protein | CE20794 | |||||
Corresponding_PCR_product | cenix:221-e1_2 | |||||
cenix:221-f1_2 | ||||||
cenix:221-g1_2 | ||||||
mv_F45D11.14_2 | ||||||
mv_F45D11.15_2 | ||||||
sjj_F45D11.b_2 | ||||||
sjj_F45D11.c_2 | ||||||
sjj_F45D11.d_2 | ||||||
smd_F45D11.c_2 | ||||||
smd_F45D11.d_2 | ||||||
Corresponding_oligo_set | 186801_s_at | |||||
RNAi_result | WBRNAi00047370 | |||||
WBRNAi00014993 | ||||||
WBRNAi00047372 | ||||||
WBRNAi00047371 | ||||||
WBRNAi00032287 | ||||||
WBRNAi00014992 | ||||||
Microarray_results | 186801_s_at | |||||
Brief_identification | B30.2/SPRY domain-containing protein | Accession_evidence | UniProt | TR:G5EFS5 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |