WormBase Tree Display for CDS: F44F4.11
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F44F4.11 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_II | |||
Structure | Source_exons | 1 | 693 | |||
747 | 1267 | |||||
1313 | 1445 | |||||
DB_info | Database | TrEMBL | UniProtAcc | G5EDD4 | ||
UniProt | UniProtAcc | G5EDD4 | ||||
UniProt_GCRP | UniProtAcc | G5EDD4 | ||||
AlphaFold | entry | G5EDD4 | ||||
NCBI_protein | GI_number | GI:3877067 | ||||
Protein_id | CHROMOSOME_II | CAA85463 | 1 | |||
DB_remark | TBA-4 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain), PF03953 (Tubulin C-terminal domain); contains similarity to Interpro domains IPR002452 (Alpha tubulin), IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR023123 (Tubulin, C-terminal), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR037103 (Tubulin/FtsZ-like, C-terminal domain), IPR036525 (Tubulin/FtsZ, GTPase domain superfamily), IPR008280 (Tubulin/FtsZ, C-terminal) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006530 | ||||
Corresponding_transcript | F44F4.11.1 | |||||
Corresponding_protein | CE18680 | |||||
Corresponding_PCR_product | WBPaper00024346:F44F4_1.1 | |||||
cenix:221-d1 | ||||||
cenix:223-e12 | ||||||
cenix:24-f8 | ||||||
mv_F44F4.11 | ||||||
sjj_F44F4.11 | ||||||
Corresponding_oligo_set (20) | ||||||
Matching_cDNA (36) | ||||||
RNAi_result (42) | ||||||
Microarray_results (22) | ||||||
Brief_identification | Tubulin alpha chain | Accession_evidence | UniProt | TR:G5EDD4 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf001388 | |||||
Method | curated |