WormBase Tree Display for Gene: WBGene00006530
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| WBGene00006530 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tba-4 | |||||||
| Sequence_name | F44F4.11 | ||||||||
| Molecular_name | F44F4.11 | ||||||||
| F44F4.11.1 | |||||||||
| CE18680 | |||||||||
| Other_name | CELE_F44F4.11 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | tba-4 | ||||||||
| DB_info | Database | AceView | gene | 2L209 | |||||
| WormQTL | gene | WBGene00006530 | |||||||
| WormFlux | gene | WBGene00006530 | |||||||
| NDB | locus_tag | CELE_F44F4.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006530|UniProtKB=G5EDD4 | |||||||
| family | PTHR11588 | ||||||||
| NCBI | gene | 174680 | |||||||
| RefSeq | protein | NM_063950.9 | |||||||
| TrEMBL | UniProtAcc | G5EDD4 | |||||||
| UniProt_GCRP | UniProtAcc | G5EDD4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tba | ||||||||
| Allele (22) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes alpha tubulin. [SQ] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (25) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Concise_description | tba-4 encodes a member of the alpha tubulin family that also includes tba-1, tba-2, and tba-3, and affects embryonic viability. | Paper_evidence | WBPaper00006395 | |||||
| WBPaper00014933 | |||||||||
| WBPaper00021779 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable GTP binding activity. Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in microtubule cytoskeleton organization and mitotic cell cycle. Predicted to be located in cytoplasm and microtubule. Is an ortholog of human TUBAL3 (tubulin alpha like 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44F4.11 | |||||||
| Corresponding_transcript | F44F4.11.1 | ||||||||
| Other_sequence (129) | |||||||||
| Associated_feature | WBsf989522 | ||||||||
| WBsf989523 | |||||||||
| WBsf1013115 | |||||||||
| WBsf1013116 | |||||||||
| WBsf222083 | |||||||||
| Experimental_info | RNAi_result (42) | ||||||||
| Expr_pattern | Expr1019960 | ||||||||
| Expr1032681 | |||||||||
| Expr1151169 | |||||||||
| Expr2017311 | |||||||||
| Expr2035446 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (233) | |||||||||
| Interaction (266) | |||||||||
| Map_info | Map | II | Position | 3.1331 | Error | 9.3e-05 | |||
| Positive | Positive_clone | F44F4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00014933 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042741 | |||||||||
| WBPaper00049531 | |||||||||
| WBPaper00051909 | |||||||||
| WBPaper00052008 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059214 | |||||||||
| WBPaper00064957 | |||||||||
| Remark | Sequence connection from [Gogonea CB, Siddiqui SS] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
