WormBase Tree Display for CDS: F25B4.1
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F25B4.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F25B4 | |||
Structure | Source_exons | 1 | 74 | |||
176 | 361 | |||||
418 | 1022 | |||||
1331 | 1674 | |||||
DB_info | Database | KEGG | KEGG_id | 2.1.2.10 | ||
TrEMBL | UniProtAcc | Q22968 | ||||
UniProt | UniProtAcc | Q22968 | ||||
UniProt_GCRP | UniProtAcc | Q22968 | ||||
AlphaFold | entry | Q22968 | ||||
NCBI_protein | GI_number | GI:351057896 | ||||
TREEFAM | TREEFAM_ID | TF313026 | ||||
Protein_id | CHROMOSOME_V | CCD64504 | 1 | |||
DB_remark | GCST-1 protein; contains similarity to Pfam domains PF01571 (Aminomethyltransferase folate-binding domain), PF08669 (Glycine cleavage T-protein C-terminal barrel domain); contains similarity to Interpro domains IPR006222 (Aminomethyltransferase, folate-binding domain), IPR027266 (GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1), IPR028896 (Aminomethyltransferase-like), IPR029043 (Glycine cleavage T-protein/YgfZ, C-terminal), IPR006223 (Glycine cleavage system T protein), IPR013977 (Glycine cleavage T-protein, C-terminal barrel domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00017765 | ||||
Corresponding_transcript | F25B4.1.1 | |||||
Corresponding_protein | CE09620 | |||||
Corresponding_PCR_product | cenix:23-g12 | |||||
mv_G_YK2572 | ||||||
sjj_F25B4.1 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (66) | ||||||
RNAi_result | WBRNAi00013845 | |||||
WBRNAi00113373 | ||||||
WBRNAi00045465 | ||||||
WBRNAi00106967 | ||||||
WBRNAi00113372 | ||||||
WBRNAi00033334 | ||||||
Microarray_results (20) | ||||||
Brief_identification | Aminomethyltransferase | Accession_evidence | UniProt | TR:Q22968 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf008072 | |||||
Method | curated |