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WormBase Tree Display for CDS: F25B4.1

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Name Class

F25B4.1EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF25B4
StructureSource_exons174
176361
4181022
13311674
DB_infoDatabaseKEGGKEGG_id2.1.2.10
TrEMBLUniProtAccQ22968
UniProtUniProtAccQ22968
UniProt_GCRPUniProtAccQ22968
AlphaFoldentryQ22968
NCBI_proteinGI_numberGI:351057896
TREEFAMTREEFAM_IDTF313026
Protein_idCHROMOSOME_VCCD645041
DB_remarkGCST-1 protein; contains similarity to Pfam domains PF01571 (Aminomethyltransferase folate-binding domain), PF08669 (Glycine cleavage T-protein C-terminal barrel domain); contains similarity to Interpro domains IPR006222 (Aminomethyltransferase, folate-binding domain), IPR027266 (GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1), IPR028896 (Aminomethyltransferase-like), IPR029043 (Glycine cleavage T-protein/YgfZ, C-terminal), IPR006223 (Glycine cleavage system T protein), IPR013977 (Glycine cleavage T-protein, C-terminal barrel domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00017765
Corresponding_transcriptF25B4.1.1
Corresponding_proteinCE09620
Corresponding_PCR_productcenix:23-g12
mv_G_YK2572
sjj_F25B4.1
Corresponding_oligo_set (18)
Matching_cDNA (66)
RNAi_resultWBRNAi00013845
WBRNAi00113373
WBRNAi00045465
WBRNAi00106967
WBRNAi00113372
WBRNAi00033334
Microarray_results (20)
Brief_identificationAminomethyltransferaseAccession_evidenceUniProtTR:Q22968
RNASeq_FPKM (74)
Associated_featureWBsf008072
Methodcurated