WormBase Tree Display for CDS: F08F1.6
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F08F1.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F08F1 | |||
Structure | Source_exons | 1 | 37 | |||
89 | 183 | |||||
512 | 682 | |||||
737 | 811 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O17387 | ||
UniProt | UniProtAcc | O17387 | ||||
UniProt_GCRP | UniProtAcc | O17387 | ||||
AlphaFold | entry | O17387 | ||||
NCBI_protein | GI_number | GI:351061255 | ||||
TREEFAM | TREEFAM_ID | TF320400 | ||||
Protein_id | CHROMOSOME_X | CCD69029 | 1 | |||
DB_remark | SPP-13 protein; contains similarity to Pfam domain PF03489 (Saposin-like type B, region 2); contains similarity to Interpro domains IPR008138 (Saposin B type, region 2), IPR011001 (Saposin-like), IPR008139 (Saposin B type domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004998 | ||||
Corresponding_transcript | F08F1.6.1 | |||||
Corresponding_protein | CE09253 | |||||
Corresponding_PCR_product | cenix:136-c7 | |||||
mv_F08F1.6 | ||||||
sjj_F08F1.6 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (35) | ||||||
RNAi_result | WBRNAi00044011 | |||||
WBRNAi00030651 | ||||||
WBRNAi00012900 | ||||||
WBRNAi00075921 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Saposin B-type domain-containing protein | Accession_evidence | UniProt | TR:O17387 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |