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WormBase Tree Display for CDS: F08F1.6

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Name Class

F08F1.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF08F1
StructureSource_exons137
89183
512682
737811
DB_infoDatabaseTrEMBLUniProtAccO17387
UniProtUniProtAccO17387
UniProt_GCRPUniProtAccO17387
AlphaFoldentryO17387
NCBI_proteinGI_numberGI:351061255
TREEFAMTREEFAM_IDTF320400
Protein_idCHROMOSOME_XCCD690291
DB_remarkSPP-13 protein; contains similarity to Pfam domain PF03489 (Saposin-like type B, region 2); contains similarity to Interpro domains IPR008138 (Saposin B type, region 2), IPR011001 (Saposin-like), IPR008139 (Saposin B type domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00004998
Corresponding_transcriptF08F1.6.1
Corresponding_proteinCE09253
Corresponding_PCR_productcenix:136-c7
mv_F08F1.6
sjj_F08F1.6
Corresponding_oligo_set (16)
Matching_cDNA (35)
RNAi_resultWBRNAi00044011
WBRNAi00030651
WBRNAi00012900
WBRNAi00075921
Microarray_results (18)
Brief_identificationSaposin B-type domain-containing proteinAccession_evidenceUniProtTR:O17387
RNASeq_FPKM (74)
Methodcurated