WormBase Tree Display for CDS: F02G3.1c
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| F02G3.1c | SMap | S_parent | Sequence | F02G3 | |
|---|---|---|---|---|---|
| Structure | Source_exons (12) | ||||
| DB_info | Database | TrEMBL | UniProtAcc | Q8MQ86 | |
| UniProt | UniProtAcc | Q8MQ86 | |||
| UniProt_GCRP | UniProtAcc | Q8MQ86 | |||
| AlphaFold | entry | Q8MQ86 | |||
| NCBI_protein | GI_number | GI:351061165 | |||
| TREEFAM | TREEFAM_ID | TF318234 | |||
| Protein_id | CHROMOSOME_X | CCD68929 | 1 | ||
| DB_remark | NCAM-1 protein; contains similarity to Pfam domains PF07679 (Immunoglobulin I-set domain), PF13895 (Immunoglobulin domain), PF13927 (Immunoglobulin domain); contains similarity to Interpro domains IPR009138 (Neural cell adhesion), IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin type III), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily), IPR036116 (Fibronectin type III superfamily) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | Accession_evidence | EMBL | BJ124594 | ||
| Visible | Gene | WBGene00017184 | |||
| Corresponding_transcript | F02G3.1c.1 | ||||
| Corresponding_protein | CE30935 | ||||
| Corresponding_PCR_product | cenix:71-h6 | ||||
| mv_F02G3.1 | |||||
| sjj_F02G3.1 | |||||
| Corresponding_oligo_set (15) | |||||
| Matching_cDNA | male_Nanopore_Roach_150026 | ||||
| young_adult_Nanopore_Roach_19203 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_93056 | |||||
| L1_Nanopore_Roach_5499 | |||||
| L3_Nanopore_Roach_5341 | |||||
| YA_Nanopore_Li_62532 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_18105 | Inferred_automatically | transcript_builder.pl | |||
| yk1313a12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk322d2.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00043832 | ||||
| WBRNAi00012789 | |||||
| Microarray_results (22) | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 13 Jun 2002 00:00:00 | WBPerson1848 | |||
| Method | curated |
