WormBase Tree Display for CDS: D1025.2
expand all nodes | collapse all nodes | view schema
D1025.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | D1025 | |||
Structure | Source_exons | 1 | 147 | |||
196 | 288 | |||||
674 | 880 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O62122 | ||
UniProt | UniProtAcc | O62122 | ||||
UniProt_GCRP | UniProtAcc | O62122 | ||||
AlphaFold | entry | O62122 | ||||
NCBI_protein | GI_number | GI:3875341 | ||||
TREEFAM | TREEFAM_ID | TF300258 | ||||
Protein_id | CHROMOSOME_X | CAB05472 | 1 | |||
DB_remark | GCSH-1 protein; contains similarity to Pfam domain PF01597 (Glycine cleavage H-protein); contains similarity to Interpro domains IPR011053 (Single hybrid motif), IPR033753 (Glycine cleavage system H-protein/Simiate), IPR017453 (Glycine cleavage system H-protein, subgroup), IPR002930 (Glycine cleavage system H-protein) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00008354 | ||||
Corresponding_transcript | D1025.2.1 | |||||
Corresponding_protein | CE17610 | |||||
Corresponding_PCR_product | cenix:78-c6 | |||||
mv_D1025.2 | ||||||
sjj_D1025.2 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (25) | ||||||
RNAi_result | WBRNAi00012511 | |||||
WBRNAi00043358 | ||||||
WBRNAi00030328 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Glycine cleavage system H protein | Accession_evidence | UniProt | TR:O62122 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf019335 | |||||
Method | curated |