WormBase Tree Display for CDS: CRE17209
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CRE17209 | SMap | S_parent | Sequence | Crem_Contig24 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 35 | ||
85 | 317 | ||||
446 | 558 | ||||
604 | 897 | ||||
1077 | 1264 | ||||
1311 | 1413 | ||||
1463 | 1708 | ||||
1896 | 1988 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF315187 | |
DB_remark | CRE-APM-3 protein; contains similarity to Pfam domains PF00928 (Adaptor complexes medium subunit family), PF01217 (Clathrin adaptor complex small chain); contains similarity to Interpro domains IPR022775 (AP complex, mu/sigma subunit), IPR028565 (Mu homology domain), IPR036168 (AP-2 complex subunit mu, C-terminal superfamily), IPR011012 (Longin-like domain superfamily), IPR001392 (Clathrin adaptor, mu subunit) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis remanei | ||||
Properties | Coding | CDS | |||
Prediction_status | Predicted | ||||
Visible | Gene | WBGene00060198 | |||
Corresponding_transcript | CRE17209.1 | ||||
Corresponding_protein | RP34401 | ||||
Corresponding_oligo_set | GPL14146_CRE17209_285-344_0.821_72_C | ||||
GPL14146_CRE17209_460-519_0.899_27_B | |||||
GPL14146_CRE17209_586-645_0.906_23_A | |||||
Microarray_results | GPL14146_CRE17209_285-344_0.821_72_C | ||||
GPL14146_CRE17209_460-519_0.899_27_B | |||||
GPL14146_CRE17209_586-645_0.906_23_A | |||||
RNASeq_FPKM (6) | |||||
Method | curated |