CRE00079 | SMap | S_parent | Sequence | Crem_Contig0 |
| Structure | Source_exons | 1 | 69 |
| | | 378 | 427 |
| | | 530 | 663 |
| | | 842 | 912 |
| | | 1324 | 1526 |
| | | 1625 | 1916 |
| | | 2045 | 2222 |
| | | 2358 | 2446 |
| | | 2731 | 2786 |
| | | 2839 | 3023 |
| | | 3070 | 3169 |
| | | 3527 | 3699 |
| | | 3753 | 4030 |
| | | 4076 | 4452 |
| | | 4506 | 4633 |
| | | 4684 | 4797 |
| | | 4941 | 5272 |
| | | 5320 | 5478 |
| | | 5513 | 5924 |
| | | 6093 | 6162 |
| | | 6538 | 6891 |
| | | 7075 | 7325 |
| | | 7379 | 7532 |
| | | 7553 | 7770 |
| | | 7821 | 7960 |
| | | 8010 | 8204 |
| DB_info | Database | TREEFAM | TREEFAM_ID | TF321703 |
| | DB_remark | CRE-UNC-10 protein; contains similarity to Pfam domains PF00168 (C2 domain), PF02318 (FYVE-type zinc finger); contains similarity to Interpro domains IPR041282 (FYVE-type zinc finger), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR039032 (Rim-like), IPR011011 (Zinc finger, FYVE/PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR035892 (C2 domain superfamily), IPR000008 (C2 domain) |
| Origin | From_laboratory | RW |
| | Species | Caenorhabditis remanei |
| Properties | Coding | CDS |
| | | Prediction_status | Partially_confirmed |
| Visible | Gene | WBGene00051358 |
| | Corresponding_transcript | CRE00079.1 |
| | Corresponding_protein | RP40439 |
| | Corresponding_oligo_set | GPL14146_CRE00079_2431-2490_0.803_79_C |
| | | GPL14146_CRE00079_4666-4725_0.951_1_A |
| | | GPL14146_CRE00079_4732-4791_0.945_5_B |
| | Microarray_results | GPL14146_CRE00079_2431-2490_0.803_79_C |
| | | GPL14146_CRE00079_4666-4725_0.951_1_A |
| | | GPL14146_CRE00079_4732-4791_0.945_5_B |
| | RNASeq_FPKM | WBls:0000004 | 0.668663 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881 |
| | | | 0.70527 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882 |
| | | WBls:0000024 | 11.5539 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311803 |
| | | | 15.0807 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798 |
| | | | 15.5735 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802 |
| | | | 17.0892 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801 |
| | | | 17.3004 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016 |
| | | | 18.3657 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010 |
| | | | 19.6923 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799 |
| | | | 20.4731 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800 |
| | | | 21.216 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015 |
| | | | 22.3716 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017 |
| | | | 22.9699 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990 |
| | | | 23.1367 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004 |
| | | | 23.3971 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995 |
| | | | 23.4164 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992 |
| | | | 23.6329 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019 |
| | | | 23.7265 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009 |
| | | | 23.7267 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008 |
| | | | 24.1521 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013 |
| | | | 24.2753 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003 |
| | | | 24.5526 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018 |
| | | | 25.3431 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002 |
| | | | 25.3739 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993 |
| | | | 25.5284 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011 |
| | | | 25.6076 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012 |
| | | | 26.318 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991 |
| | | | 26.3662 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007 |
| | | | 26.3829 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996 |
| | | | 26.678 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001 |
| | | | 26.851 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997 |
| | | | 27.3236 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006 |
| | | | 27.553 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988 |
| | | | 28.0001 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021 |
| | | | 28.623 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000 |
| | | | 28.9711 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020 |
| | | | 29.0035 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014 |
| | | | 29.1356 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994 |
| | | | 29.3633 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987 |
| | | | 30.472 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986 |
| | | | 30.4956 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989 |
| | | | 31.1919 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005 |
| | | | 32.0938 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999 |
| | | | 35.7344 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998 |
| | | | 14.4523 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488 |
| | | | 16.6257 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482 |
| | | | 17.769 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481 |
| | | | 17.8107 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479 |
| | | | 19.5411 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490 |
| | | | 19.7573 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480 |
| | | | 20.1218 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487 |
| | | | 20.2451 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484 |
| | | | 20.277 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483 |
| | | | 23.185 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485 |
| | | | 24.7246 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489 |
| | | | 28.6656 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486 |
| | | WBls:0000027 | 1.99058 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082 |
| | | | 6.98192 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884 |
| | | | 7.0932 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883 |
| | | | 8.51361 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885 |
| | | WBls:0000038 | 0.660858 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083 |
| | | | 2.55641 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879 |
| | | | 3.11364 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880 |
| | | WBls:0000041 | 0.582118 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973 |
| | | | 0.737088 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971 |
| | | | 0.753948 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972 |
| | | | 1.12555 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974 |
| | | | 1.17365 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975 |
| | | | 1.24813 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976 |
| | | WBls:0000063 | 0.111233 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888 |
| | | | 0.363968 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886 |
| | | | 0.460755 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889 |
| | | | 0.575507 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891 |
| | | | 0.578175 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887 |
| | | | 0.586491 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890 |
| | | | 0.66203 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893 |
| | | | 0.692578 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895 |
| | | | 1.99916 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894 |
| | | | 3.02071 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892 |
| Method | curated |