Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CJA00245

expand all nodes | collapse all nodes | view schema

Name Class

CJA00245EvidenceCurator_confirmedWBPerson4025
SMapS_parentSequenceCjap.Contig18013
StructureSource_exons1361
13461506
57555829
DB_infoDB_remarkCJP-MIG-2 protein; contains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR005225 (Small GTP-binding protein domain), IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00119449
Corresponding_transcriptCJA00245.1
Corresponding_proteinJA68535
Corresponding_oligo_setGPL14145_CJA00245_277-336_0.727_18_B
GPL14145_CJA00245_380-439_0.931_2_C
GPL14145_CJA00245_525-584_0.679_29_A
Microarray_resultsGPL14145_CJA00245_277-336_0.727_18_B
GPL14145_CJA00245_380-439_0.931_2_C
GPL14145_CJA00245_525-584_0.679_29_A
RNASeq_FPKMWBls:000000473.1375From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002722.5543From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003812.5198From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
20.9344From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004114.4513From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
16.1224From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
17.1854From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
29.1572From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
67.5543From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
68.1131From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
70.0875From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
9.54445From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig18013.g23272.t1[100726 mh6]
[150402 gw3] Created this isoform based on the RNASeq splice data.Curator_confirmedWBPerson4025
From_analysisRNASeq
Methodcurated