WormBase Tree Display for CDS: C52G5.2
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C52G5.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C52G5 | |||
Structure | Source_exons | 1 | 72 | |||
412 | 480 | |||||
757 | 857 | |||||
1147 | 1253 | |||||
1598 | 1701 | |||||
1757 | 1882 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q18793 | ||
UniProt | UniProtAcc | Q18793 | ||||
UniProt_GCRP | UniProtAcc | Q18793 | ||||
AlphaFold | entry | Q18793 | ||||
NCBI_protein | GI_number | GI:3875164 | ||||
Protein_id | CHROMOSOME_X | CAA91797 | 1 | |||
DB_remark | contains similarity to Pfam domain PF08768 (THAP4-like, heme-binding beta-barrel domain); contains similarity to Interpro domains IPR012674 (Calycin), IPR014878 (THAP4-like, heme-binding beta-barrel domain), IPR045165 (Nitrobindin family) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00008260 | ||||
Corresponding_transcript | C52G5.2.1 | |||||
Corresponding_protein | CE03086 | |||||
Corresponding_PCR_product | cenix:123-g2 | |||||
mv_C52G5.2 | ||||||
sjj_C52G5.2 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (49) | ||||||
RNAi_result | WBRNAi00002344 | |||||
WBRNAi00012327 | ||||||
WBRNAi00043053 | ||||||
WBRNAi00030092 | ||||||
WBRNAi00092963 | ||||||
Microarray_results (16) | ||||||
Brief_identification | THAP4-like heme-binding beta-barrel domain-containing protein | Accession_evidence | UniProt | TR:Q18793 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |