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WormBase Tree Display for CDS: C47A10.1

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Name Class

C47A10.1EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCHROMOSOME_V
StructureSource_exons (11)
DB_infoDatabaseTrEMBLUniProtAccG5EG58
UniProtUniProtAccG5EG58
UniProt_GCRPUniProtAccG5EG58
AlphaFoldentryG5EG58
NCBI_proteinGI_numberGI:3875004
Protein_idCHROMOSOME_VCAB039731
DB_remarkPGP-9 protein; contains similarity to Pfam domains PF00005 (ABC transporter), PF00664 (ABC transporter transmembrane region); contains similarity to Interpro domains IPR039421 (Type 1 protein exporter), IPR003439 (ABC transporter-like, ATP-binding domain), IPR011527 (ABC transporter type 1, transmembrane domain), IPR036640 (ABC transporter type 1, transmembrane domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003593 (AAA+ ATPase domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00004003
Corresponding_transcriptC47A10.1.1
Corresponding_proteinCE15714
Corresponding_PCR_productcenix:40-a3
mv_C47A10.1
sjj_C47A10.1
Corresponding_oligo_set (16)
Matching_cDNA (34)
RNAi_resultWBRNAi00077359
WBRNAi00070085
WBRNAi00042636
WBRNAi00012052
WBRNAi00001328
WBRNAi00022567
Microarray_results (18)
RNASeq_FPKM (74)
RemarkAnnotated using Pfam
Methodcurated