WormBase Tree Display for CDS: C47A10.1
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C47A10.1 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_V | ||
Structure | Source_exons (11) | ||||
DB_info | Database | TrEMBL | UniProtAcc | G5EG58 | |
UniProt | UniProtAcc | G5EG58 | |||
UniProt_GCRP | UniProtAcc | G5EG58 | |||
AlphaFold | entry | G5EG58 | |||
NCBI_protein | GI_number | GI:3875004 | |||
Protein_id | CHROMOSOME_V | CAB03973 | 1 | ||
DB_remark | PGP-9 protein; contains similarity to Pfam domains PF00005 (ABC transporter), PF00664 (ABC transporter transmembrane region); contains similarity to Interpro domains IPR039421 (Type 1 protein exporter), IPR003439 (ABC transporter-like, ATP-binding domain), IPR011527 (ABC transporter type 1, transmembrane domain), IPR036640 (ABC transporter type 1, transmembrane domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003593 (AAA+ ATPase domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00004003 | |||
Corresponding_transcript | C47A10.1.1 | ||||
Corresponding_protein | CE15714 | ||||
Corresponding_PCR_product | cenix:40-a3 | ||||
mv_C47A10.1 | |||||
sjj_C47A10.1 | |||||
Corresponding_oligo_set (16) | |||||
Matching_cDNA (34) | |||||
RNAi_result | WBRNAi00077359 | ||||
WBRNAi00070085 | |||||
WBRNAi00042636 | |||||
WBRNAi00012052 | |||||
WBRNAi00001328 | |||||
WBRNAi00022567 | |||||
Microarray_results (18) | |||||
RNASeq_FPKM (74) | |||||
Remark | Annotated using Pfam | ||||
Method | curated |