WormBase Tree Display for CDS: C46H11.3
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C46H11.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C46H11 | |||
Structure | Source_exons | 1 | 73 | |||
153 | 268 | |||||
313 | 564 | |||||
DB_info | Database | SwissProt | UniProtAcc | P91167 | ||
UniProt | UniProtAcc | P91167 | ||||
UniProt_GCRP | UniProtAcc | P91167 | ||||
AlphaFold | entry | P91167 | ||||
NCBI_protein | GI_number | GI:351065079 | ||||
TREEFAM | TREEFAM_ID | TF319716 | ||||
Protein_id | CHROMOSOME_I | CCD66217 | 1 | |||
DB_remark | contains similarity to Pfam domain PF04699 (ARP2/3 complex 16 kDa subunit (p16-Arc)); contains similarity to Interpro domains IPR036743 (Actin-related protein 2/3 complex subunit 5 superfamily), IPR006789 (Actin-related protein 2/3 complex subunit 5) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00016729 | ||||
Corresponding_transcript | C46H11.3.1 | |||||
Corresponding_protein | CE08785 | |||||
Corresponding_PCR_product | cenix:194-f2 | |||||
mv_C46H11.3 | ||||||
sjj_C46H11.3 | ||||||
Corresponding_oligo_set (19) | ||||||
Matching_cDNA | L3_Nanopore_Roach_45107 | Inferred_automatically | transcript_builder.pl | |||
L1_Nanopore_Li_128255 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00094928 | |||||
WBRNAi00022829 | ||||||
WBRNAi00042626 | ||||||
WBRNAi00003166 | ||||||
WBRNAi00029879 | ||||||
Microarray_results (21) | ||||||
Brief_identification | Probable actin-related protein 2/3 complex subunit 5 | Accession_evidence | UniProt | SP:P91167 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |