WormBase Tree Display for CDS: C40H1.6
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| C40H1.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C40H1 | |||
| Structure | Source_exons | 1 | 96 | |||
| 146 | 210 | |||||
| 316 | 475 | |||||
| 521 | 688 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q03598 | ||
| UniProt | UniProtAcc | Q03598 | ||||
| UniProt_GCRP | UniProtAcc | Q03598 | ||||
| AlphaFold | entry | Q03598 | ||||
| NCBI_protein | GI_number | GI:3874819 | ||||
| TREEFAM | TREEFAM_ID | TF313587 | ||||
| Protein_id | CHROMOSOME_III | CAA79557 | 1 | |||
| DB_remark | UFC-1 protein; contains similarity to Pfam domain PF08694 (Ubiquitin-fold modifier-conjugating enzyme 1); contains similarity to Interpro domains IPR016135 (Ubiquitin-conjugating enzyme/RWD-like), IPR014806 (Ubiquitin-fold modifier-conjugating enzyme 1) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00008041 | ||||
| Corresponding_transcript | C40H1.6.1 | |||||
| Corresponding_protein | CE00114 | |||||
| Corresponding_PCR_product | TH:330H11 | |||||
| cenix:330-h11 | ||||||
| mv_C40H1.6 | ||||||
| sjj_C40H1.6 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (40) | ||||||
| RNAi_result | WBRNAi00109724 | |||||
| WBRNAi00109818 | ||||||
| WBRNAi00109677 | ||||||
| WBRNAi00042262 | ||||||
| WBRNAi00006787 | ||||||
| WBRNAi00029712 | ||||||
| WBRNAi00109771 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | Ubiquitin-fold modifier-conjugating enzyme 1 | Accession_evidence | UniProt | SP:Q03598 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf004073 | |||||
| Method | curated |
