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WormBase Tree Display for CDS: C29F3.1

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Name Class

C29F3.1EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC29F3
StructureSource_exons1210
253993
12291729
17782301
26562947
DB_infoDatabaseTrEMBLUniProtAccO17612
UniProtUniProtAccO17612
UniProt_GCRPUniProtAccO17612
AlphaFoldentryO17612
NCBI_proteinGI_numberGI:3874565
TREEFAMTREEFAM_IDTF352288
Protein_idCHROMOSOME_VCAB027991
DB_remarkECH-1.1 protein; contains similarity to Pfam domains PF00378 (Enoyl-CoA hydratase/isomerase), PF00725 (3-hydroxyacyl-CoA dehydrogenase, C-terminal domain), PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain); contains similarity to Interpro domains IPR029045 (ClpP/crotonase-like domain superfamily), IPR008927 (6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily), IPR006108 (3-hydroxyacyl-CoA dehydrogenase, C-terminal), IPR012803 (Fatty acid oxidation complex, alpha subunit, mitochondrial), IPR036291 (NAD(P)-binding domain superfamily), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding), IPR001753 (Enoyl-CoA hydratase/isomerase)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00001150
Corresponding_transcriptC29F3.1.1
C29F3.1.2
Corresponding_proteinCE08435
Corresponding_PCR_productcenix:19-d8
mv_C29F3.1
sjj_C29F3.1
Corresponding_oligo_set (20)
Matching_cDNA (33)
RNAi_resultWBRNAi00011330
WBRNAi00092839
WBRNAi00092838
WBRNAi00029316
WBRNAi00114314
WBRNAi00102614
WBRNAi00041460
Microarray_results (20)
Brief_identificationEnoyl-CoA hydrataseAccession_evidenceUniProtTR:O17612
RNASeq_FPKM (74)
Associated_featureWBsf015299
Methodcurated