WormBase Tree Display for CDS: C15H11.8
expand all nodes | collapse all nodes | view schema
C15H11.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C15H11 | |||
Structure | Source_exons | 1 | 127 | |||
176 | 293 | |||||
355 | 469 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O17587 | ||
UniProt | UniProtAcc | O17587 | ||||
UniProt_GCRP | UniProtAcc | O17587 | ||||
AlphaFold | entry | O17587 | ||||
NCBI_protein | GI_number | GI:3874352 | ||||
TREEFAM | TREEFAM_ID | TF313881 | ||||
Protein_id | CHROMOSOME_V | CAB02739 | 1 | |||
DB_remark | RPOA-12 protein; contains similarity to Pfam domain PF01096 (Transcription factor S-II (TFIIS)); contains similarity to Interpro domains IPR001222 (Zinc finger, TFIIS-type), IPR012164 (DNA-directed RNA polymerase subunit/transcription factor S) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00007616 | ||||
Corresponding_transcript | C15H11.8.1 | |||||
Corresponding_protein | CE08185 | |||||
Corresponding_PCR_product | cenix:132-g9 | |||||
mv_C15H11.8 | ||||||
sjj_C15H11.8 | ||||||
Corresponding_oligo_set (20) | ||||||
Matching_cDNA (26) | ||||||
RNAi_result (22) | ||||||
Microarray_results (21) | ||||||
Brief_identification | DNA-directed RNA polymerase subunit | Accession_evidence | UniProt | TR:O17587 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf014727 | |||||
Method | curated |