WormBase Tree Display for CDS: C01B4.6
expand all nodes | collapse all nodes | view schema
| C01B4.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C01B4 | |||
| Structure | Source_exons | 1 | 145 | |||
| 242 | 396 | |||||
| 445 | 543 | |||||
| 732 | 1244 | |||||
| 1296 | 1376 | |||||
| DB_info | Database | KEGG | KEGG_id | 5.1.3.3 | ||
| TrEMBL | UniProtAcc | G5ECR6 | ||||
| UniProt | UniProtAcc | G5ECR6 | ||||
| UniProt_GCRP | UniProtAcc | G5ECR6 | ||||
| AlphaFold | entry | G5ECR6 | ||||
| NCBI_protein | GI_number | GI:351018344 | ||||
| TREEFAM | TREEFAM_ID | TF324207 | ||||
| Protein_id | CHROMOSOME_V | CCD62289 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01263 (Aldose 1-epimerase); contains similarity to Interpro domains IPR008183 (Aldose 1-/Glucose-6-phosphate 1-epimerase), IPR015443 (Aldose 1-epimerase), IPR011013 (Galactose mutarotase-like domain superfamily), IPR014718 (Glycoside hydrolase-type carbohydrate-binding) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00015270 | ||||
| Corresponding_transcript | C01B4.6.1 | |||||
| Corresponding_protein | CE20475 | |||||
| Corresponding_PCR_product | cenix:165-c2_1 | |||||
| mv_G_YK2391_1_1 | ||||||
| sjj_C01B4.6 | ||||||
| sjj_Y19D10A.c_1 | ||||||
| sjj_Y19D10A.n_1 | ||||||
| smd_Y19D10A.n_1 | ||||||
| RNAi_result | WBRNAi00020110 | |||||
| WBRNAi00020100 | ||||||
| WBRNAi00039263 | ||||||
| WBRNAi00024427 | ||||||
| WBRNAi00027153 | ||||||
| WBRNAi00022270 | ||||||
| WBRNAi00024426 | ||||||
| Microarray_results | SMD_C01B4.6 | |||||
| Brief_identification | Aldose 1-epimerase | Accession_evidence | UniProt | TR:G5ECR6 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 18 Aug 2015 00:00:00 | WBPerson4025 | ||||
| Remark | SL1 trans-spliced; see ESTs yk456a10.5 and yk472e8.5 | |||||
| Method | curated |
