WormBase Tree Display for CDS: Bm699c

Bm699c Evidence: Curator_confirmed: WBPerson1983
  SMap: S_parent: Sequence: Bm_v4_ChrX_scaffold_001
  Structure: Source_exons: 1 60
      277 372
      662 755
      1030 1208
      1601 1740
      2975 3152
  DB_info: Database: TrEMBL UniProtAcc A0A0J9Y3B4
      UniProt UniProtAcc A0A0J9Y3B4
      AlphaFold entry A0A0J9Y3B4
    Protein_id: Bm_v4_ChrX_scaffold_001 CDQ00881 1
    DB_remark: BMA-LIN-22 protein; contains similarity to Pfam domain PF00010 (Helix-loop-helix DNA-binding domain); contains similarity to Interpro domains IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
  Origin: From_laboratory: HX
    Species: Brugia malayi
  Properties: Coding: CDS
      CDS_predicted_by: RATT
      Prediction_status: Confirmed
    Isoform: Inferred_automatically: xace
  Visible: Gene: WBGene00220960
    Corresponding_transcript: Bm699c.1
    Corresponding_protein: BM30389
    RNASeq_FPKM: WBls:0000078 0.004714 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
        0.016815 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        2.94658 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
            RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        5e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
        6.93776 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
      WBls:0000080 17.0373 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
        18.1447 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
            RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
      WBls:0000081 0.000483 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539755
        0.001862 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP090644.SRX2200121
        0.002004 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539813
        0.002835 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.male.WBbt:0007833.SRP068692.SRX1539862
        0.004555 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2415043
        0.005146 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539758
        0.009907 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2414981
        0.01752 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Male.WBbt:0007833.SRP068692.SRX1539865
        0.190546 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.ERP000948.ERX026030
        0.420108 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2505954
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.ERP000948.ERX026028
            RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2415044
            RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2414982
            RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2416292
            RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2416293
        1e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539952
        2e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2409230
        22.9127 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2505955
        25.4321 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2505953
        3.10131 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539954
        4e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2409229
        6.3e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP090644.SRX2200122
        9e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539799
      WBls:0000082 0.000142 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
        0.000491 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        0.003037 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
        2.10344 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
        3.57745 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
      WBls:0000083 0.000174 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447468
        0.00018 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176949
        0.000191 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447472
        0.000206 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447460
        0.00026 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176961
        0.000304 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447448
        0.000401 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539734
        0.000414 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176958
        0.00078 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447457
        0.00082 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447446
        0.001203 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176952
        0.001368 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.SRP068692.SRX1539740
        0.001679 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176968
        0.002977 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176964
        0.003187 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447451
        0.00424 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.ERP000948.ERX026029
        0.005617 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200123
        0.040128 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176965
        0.049531 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.SRP068692.SRX1539737
        0.286609 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200118
        0.304463 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539085
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176947
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447458
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447462
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447469
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447470
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447463
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176967
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447452
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447443
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447447
            RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200130
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447473
            RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200126
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447442
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176950
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447441
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447444
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447445
        1.13168 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200117
        1.2e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200120
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176957
        12.3709 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447467
        12.4839 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447464
        1.25005 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200127
        1.7e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200128
        1.89616 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176955
        2.16213 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176963
        2.3e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200129
        2.50018 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200119
        2.57936 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447450
        26.6769 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447471
        3.1e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539707
        3.41878 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447440
        3.46125 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176970
        3.4839 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176956
        4.0617 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447461
        4.38349 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447459
        4.64494 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026037
        4.9e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176954
        4.98222 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026036
        5.4e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176959
        5.55932 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176951
        5.62388 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447454
        5.7e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447455
        5.74939 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176960
        5.8e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176953
        1e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447465
            RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200124
            RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447453
        6.64817 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026032
        7.4591 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447466
        7.6e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176969
        7.67054 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176948
        8.4e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200125
        8.37014 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447456
        8.8e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176962
        9.4e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176966
        1e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP068692.SRX1539730
        9.9e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447449
      WBls:0000092 0.002493 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
      WBls:0000094 0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
            RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
      WBls:0000097 0.000119 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
        2.49518 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
      WBls:0000662 0.011212 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
        3.75057 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
      WBls:0000663 0.035285 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
  Method: curated