WormBase Tree Display for CDS: Bm6772

Bm6772 SMap: S_parent: Sequence: Bm_v4_Chr1_scaffold_001
  Structure: Source_exons: 1 221
      394 523
      794 1423
  DB_info: Database: TrEMBL UniProtAcc A0A1U7F445
      UniProt UniProtAcc A0A1U7F445
      AlphaFold entry A0A1U7F445
      UniProt_GCRP UniProtAcc A0A1U7F445
    Protein_id: Bm_v4_Chr1_scaffold_001 CRZ25359 1
    DB_remark: contains similarity to Pfam domain PF00642 (Zinc finger C-x8-C-x5-C-x3-H type (and similar)); contains similarity to Interpro domains IPR000571 (Zinc finger, CCCH-type), IPR036855 (Zinc finger, CCCH-type superfamily)
  Origin: From_laboratory: HX
    Species: Brugia malayi
  Properties: Coding: CDS
      CDS_predicted_by: RATT
      Prediction_status: Confirmed
  Visible: Gene: WBGene00227033
    Corresponding_transcript: Bm6772.1
      Bm6772.2
    Corresponding_protein: BM32923
    Matching_cDNA: brugia_GG6033|c8_g2_i3 Inferred_automatically: transcript_builder.pl
      brugia_GG6033|c8_g2_i6 Inferred_automatically: transcript_builder.pl
      brugia_GG6033|c8_g2_i4 Inferred_automatically: transcript_builder.pl
    RNASeq_FPKM: WBls:0000078 10.8989 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        11.568 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
        24.1508 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        24.7505 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
        27.0652 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
        4.70244 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
        4.87397 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
      WBls:0000080 20.9024 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
        23.1341 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        24.5487 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
        25.7061 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
      WBls:0000081 0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.ERP000948.ERX026028
        11.2615 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP090644.SRX2200121
        12.6537 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2415044
        15.3191 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2505954
        15.6063 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539952
        16.2272 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2415043
        16.4595 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539954
        17.2426 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Male.WBbt:0007833.SRP068692.SRX1539865
        17.3206 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2416292
        17.4236 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.male.WBbt:0007833.SRP068692.SRX1539862
        18.7434 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539799
        19.0672 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539813
        20.5835 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539758
        21.1263 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2416293
        22.3108 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX1539755
        24.2713 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2505953
        25.5628 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2505955
        2.92588 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP090644.SRX2200122
        29.6302 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.ERP000948.ERX026030
        3.92205 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2414981
        4.83521 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2414982
        6.27889 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2409229
        6.68023 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000081.Unknown.WBbt:0007833.SRP068692.SRX2409230
      WBls:0000082 18.8555 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
        21.4484 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        37.137 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
        38.662 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
        38.8093 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
      WBls:0000083 11.1167 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200120
        13.4423 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200127
        13.632 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200126
        14.871 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200119
        16.5768 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200130
        20.4285 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200128
        26.065 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200118
        26.9002 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447463
        29.7659 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447462
        30.5396 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200124
        31.6991 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539707
        33.9156 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200117
        34.8425 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539085
        36.9819 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP068692.SRX1539730
        37.3358 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539734
        38.0314 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447454
        38.1333 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176960
        40.4688 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.SRP068692.SRX1539740
        41.2217 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447471
        41.7886 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447470
        43.1761 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447459
        43.6078 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447455
        44.4156 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.SRP068692.SRX1539737
        45.1466 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447445
        4.53186 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200125
        46.3573 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200123
        46.4659 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447447
        46.9469 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447464
        48.0552 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176968
        48.1572 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176957
        48.5022 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447456
        49.3751 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447446
        51.6795 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176955
        51.7586 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176964
        52.4502 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176963
        52.528 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176954
        53.0581 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447444
        53.4923 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447452
        54.2605 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176956
        55.0508 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176959
        55.8699 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447441
        56.1112 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447467
        56.3293 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176949
        56.9022 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176958
        57.0231 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176953
        57.043 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.ERP000948.ERX026029
        57.0769 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447466
        57.3298 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447457
        57.6727 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447458
        57.8191 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176962
        59.8702 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447440
        59.9992 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447468
        61.2883 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447448
        61.6822 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447451
        62.7752 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447442
        63.6097 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176961
        63.8793 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176950
        64.3427 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447460
        64.855 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176969
        65.0188 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447449
        65.7064 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176947
        66.6708 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447465
        66.9403 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176951
        67.2667 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026032
        67.4776 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447473
        68.747 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176948
        68.9478 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026037
        69.5536 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447453
        70.0818 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447469
        71.4475 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176970
        71.8133 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447472
        72.0605 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026036
        72.1314 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447443
        73.0919 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176966
        73.7418 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447461
        76.7831 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176952
        80.1186 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176967
        80.3325 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176965
        80.4639 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447450
        8.16511 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200129
      WBls:0000092 25.7348 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
        27.2529 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
      WBls:0000094 62.2184 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
        67.4663 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
      WBls:0000097 0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
        10.5845 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
        14.6426 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
        15.6972 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        18.4175 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
        29.0994 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
      WBls:0000662 37.4319 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
        40.0996 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
      WBls:0000663 72.2977 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
    Remark: [131112 pad] Renamed from Bm6772e as this is a single Isoform locus. Curator_confirmed: WBPerson1983
  Method: curated