WormBase Tree Display for CDS: ZK617.1f
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ZK617.1f | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_IV | |||
Structure | Source_exons (31) | |||||
DB_info | Database | TrEMBL | UniProtAcc | H2FLH2 | ||
UniProt | UniProtAcc | H2FLH2 | ||||
AlphaFold | entry | H2FLH2 | ||||
NCBI_protein | GI_number | GI:371570819 | ||||
Protein_id | CHROMOSOME_IV | CCF23388 | 1 | |||
DB_remark | UNC-22 protein; contains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF00069 (Protein kinase domain), PF07679 (Immunoglobulin I-set domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin type III), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR000719 (Protein kinase domain), IPR036179 (Immunoglobulin-like domain superfamily), IPR036116 (Fibronectin type III superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Isoform | From_analysis | RNASeq_Hillier_elegans | ||||
Visible | Gene | WBGene00006759 | ||||
Corresponding_transcript | ZK617.1f.1 | |||||
Corresponding_protein | CE46948 | |||||
Corresponding_PCR_product | cenix:155-g4 | |||||
mv_CAA33463 | ||||||
sjj_ZK617.1 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (15) | ||||||
RNAi_result (41) | ||||||
Microarray_results (19) | ||||||
Brief_identification | Twitchin | Accession_evidence | UniProt | SP:Q23551 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 23 Apr 2014 00:00:00 | WBPerson4025 | ||||
Remark | [111118 gw3] Added this isoform based on the RNASeq evience for a long intron in the middle of this gene. | From_analysis | RNASeq_Hillier_elegans | |||
Method | curated |